Gm36975 Gene Detail

Summary

• Symbol
  Gm36975
• Name
  predicted gene, 36975

• Feature Type
  lncRNA gene
• IDs
  MGI:5610203
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:160091894-160270642 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3958 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610203	lncRNA gene	Chr1:160091894-160270642 (+)
129S1/SvImJ	ENSMUSG00200008132	lncRNA gene	Chr1:157576465-157754428 (+)
A/J	ENSMUSG00195024379	lncRNA gene	Chr1:156924264-157096039 (+)
AKR/J	ENSMUSG00220014296	lncRNA gene	Chr1:156702133-156880887 (+)
BALB/cJ	ENSMUSG00180041192	lncRNA gene	Chr1:157146372-157318750 (+)
C3H/HeJ	ENSMUSG00175047815	lncRNA gene	Chr1:157211787-157389754 (+)
C57BL/6NJ	ENSMUSG00215041828	lncRNA gene	Chr1:157089831-157289176 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002425	antisense lncRNA gene	Chr1:150891451-151056262 (+)
CAST/EiJ	ENSTCUG00005021520	lncRNA gene	Chr1:155749337-155927914 (+)
CBA/J	ENSMUSG00210021733	lncRNA gene	Chr1:157102789-157280754 (+)
DBA/2J	ENSMUSG00185047757	lncRNA gene	Chr1:161367631-161540003 (+)
FVB/NJ	ENSMUSG00205013177	lncRNA gene	Chr1:156210451-156383369 (+)
JF1/MsJ	ENSUMUG00000038708	lncRNA gene	Chr1:160522430-160694856 (+)
LP/J	ENSMUSG00230018911	lncRNA gene	Chr1:160977899-161155851 (+)
NOD/ShiLtJ	ENSMUSG00190040652	lncRNA gene	Chr1:156949016-157127764 (+)
NZO/HlLtJ	ENSMUSG00225005662	lncRNA gene	Chr1:164594233-164772174 (+)
PWK/PhJ	ENSLUMG00010047139	lncRNA gene	Chr1:155913896-156086136 (+)
SPRET/EiJ	ENSMSPG00010046057	lncRNA gene	Chr1:159291147-159464446 (+)
WSB/EiJ	ENSIUOG00005015932	lncRNA gene	Chr1:156542516-156692485 (+)

Homology

• Gene Tree
  Gm36975
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  2
• Gene trapped
  4
• Genomic Mutations
  2 involving Gm36975
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000104302 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104302	Ensembl Gene Model | MGI Sequence Detail	178749	C57BL/6J
transcript	ENSMUST00000194105	Ensembl | MGI Sequence Detail	1828	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14