Gm36972 Gene Detail

Summary

• Symbol
  Gm36972
• Name
  predicted gene, 36972

• Feature Type
  lncRNA gene
• IDs
  MGI:5610200
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:165603437-165604724 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  205 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5610200	lncRNA gene	Chr1:165603437-165604724 (-)
129S1/SvImJ	ENSMUSG00200046713	lncRNA gene	Chr1:163104236-163105523 (-)
A/J	ENSMUSG00195048550	lncRNA gene	Chr1:162412839-162414126 (-)
AKR/J	ENSMUSG00220014177	lncRNA gene	Chr1:162201372-162202659 (-)
BALB/cJ	ENSMUSG00180037339	lncRNA gene	Chr1:162658249-162659536 (-)
C3H/HeJ	ENSMUSG00175044856	lncRNA gene	Chr1:162753989-162755280 (-)
C57BL/6NJ	ENSMUSG00215040685	lncRNA gene	Chr1:162539900-162541189 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004553	lincRNA gene	Chr1:156182745-156184003 (-)
CAST/EiJ	ENSTCUG00005021231	lncRNA gene	Chr1:161173733-161175015 (-)
CBA/J	ENSMUSG00210021753	lncRNA gene	Chr1:162628466-162629753 (-)
DBA/2J	ENSMUSG00185011891	lncRNA gene	Chr1:166876006-166877280 (-)
FVB/NJ	ENSMUSG00205010268	lncRNA gene	Chr1:161667473-161668770 (-)
JF1/MsJ	ENSUMUG00000012056	lncRNA gene	Chr1:166027114-166028388 (-)
LP/J	ENSMUSG00230026297	lncRNA gene	Chr1:166493321-166494608 (-)
NOD/ShiLtJ	ENSMUSG00190039563	lncRNA gene	Chr1:162460154-162461459 (-)
NZO/HlLtJ	ENSMUSG00225004617	lncRNA gene	Chr1:170079119-170080406 (-)
PWK/PhJ	ENSLUMG00010045364	lncRNA gene	Chr1:161397640-161398966 (-)
SPRET/EiJ	ENSMSPG00010049149	lncRNA gene	Chr1:164894413-164895745 (-)
WSB/EiJ	ENSIUOG00005015855	lncRNA gene	Chr1:161941580-161942869 (-)

Homology

• Gene Tree
  Gm36972
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm36972
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000104306 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104306	Ensembl Gene Model | MGI Sequence Detail	1288	C57BL/6J
transcript	ENSMUST00000194000	Ensembl | MGI Sequence Detail	676	Not Applicable

References

• Summaries
  All 4

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;