Gm36843 Gene Detail

Summary

• Symbol
  Gm36843
• Name
  predicted gene, 36843
• Synonyms
  Gm45333

• Feature Type
  lncRNA gene
• IDs
  MGI:5596002
  NCBI Gene: 102640885
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:92724053-92735634 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  369 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5596002	lncRNA gene	Chr8:92724053-92737488 (+)
129S1/SvImJ	ENSMUSG00200017873	lncRNA gene	Chr8:87078349-87089820 (+)
A/J	ENSMUSG00195028316	lncRNA gene	Chr8:87452833-87464238 (+)
AKR/J	ENSMUSG00220040741	lncRNA gene	Chr8:87449391-87460862 (+)
BALB/cJ	ENSMUSG00180025593	lncRNA gene	Chr8:87289403-87300855 (+)
C3H/HeJ	ENSMUSG00175028808	lncRNA gene	Chr8:87391203-87402602 (+)
C57BL/6NJ	ENSMUSG00215034728	lncRNA gene	Chr8:86993330-87004733 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005017515	lncRNA gene	Chr8:86862777-86874283 (+)
CBA/J	ENSMUSG00210038002	lncRNA gene	Chr8:87334096-87345549 (+)
DBA/2J	ENSMUSG00185024581	lncRNA gene	Chr8:93442843-93454294 (+)
FVB/NJ	ENSMUSG00205019147	lncRNA gene	Chr8:86418965-86430414 (+)
JF1/MsJ	ENSUMUG00000049349	lncRNA gene	Chr8:95800487-95811886 (+)
LP/J	ENSMUSG00230031517	lncRNA gene	Chr8:97072204-97083672 (+)
NOD/ShiLtJ	ENSMUSG00190017294	lncRNA gene	Chr8:87441485-87452914 (+)
NZO/HlLtJ	ENSMUSG00225041008	lncRNA gene	Chr8:100488646-100500091 (+)
PWK/PhJ	ENSLUMG00010041939	lncRNA gene	Chr8:87111687-87123084 (+)
SPRET/EiJ	ENSMSPG00010031609	lncRNA gene	Chr8:89107267-89118768 (+)
WSB/EiJ	ENSIUOG00005021584	lncRNA gene	Chr8:88170189-88181638 (+)

Homology

• Gene Tree
  Gm36843
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  4

• Ensembl
  ENSMUSG00000110274 (Evidence)
• NCBI Gene
  102640885

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110274	Ensembl Gene Model | MGI Sequence Detail	11582	C57BL/6J
transcript	ENSMUST00000326086	Ensembl | MGI Sequence Detail	903	Not Applicable

Other
Accession IDs

MGI:5791169

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14