Gm36831 Gene Detail

Summary

• Symbol
  Gm36831
• Name
  predicted gene, 36831

• Feature Type
  lncRNA gene
• IDs
  MGI:5595990
  NCBI Gene: 102640866
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr3:147095318-147104921 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  514 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595990	lncRNA gene	Chr3:147095318-147138925 (+)
129S1/SvImJ	ENSMUSG00200003751	lncRNA gene	Chr3:144010673-144021877 (+)
A/J	ENSMUSG00195003413	lncRNA gene	Chr3:144123453-144134672 (+)
AKR/J	ENSMUSG00220000424	lncRNA gene	Chr3:142561401-142572622 (+)
BALB/cJ	ENSMUSG00180027895	lncRNA gene	Chr3:143993866-144005067 (+)
C3H/HeJ	ENSMUSG00175019652	lncRNA gene	Chr3:143575765-143586942 (+)
C57BL/6NJ	ENSMUSG00215020910	lncRNA gene	Chr3:144285247-144296539 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005784	lincRNA gene	Chr3:140552148-140564248 (+)
CAST/EiJ	ENSTCUG00005001350	lncRNA gene	Chr3:144680803-144691962 (+)
CBA/J	ENSMUSG00210005135	lncRNA gene	Chr3:144253096-144264302 (+)
DBA/2J	ENSMUSG00185026110	lncRNA gene	Chr3:144861966-144873159 (+)
FVB/NJ	ENSMUSG00205025977	lncRNA gene	Chr3:143127119-143138325 (+)
JF1/MsJ	ENSUMUG00000033868	lncRNA gene	Chr3:143644385-143655511 (+)
LP/J	ENSMUSG00230019258	lncRNA gene	Chr3:146764039-146775243 (+)
NOD/ShiLtJ	ENSMUSG00190004959	lncRNA gene	Chr3:145204899-145216094 (+)
NZO/HlLtJ	ENSMUSG00225002726	lncRNA gene	Chr3:149273240-149284449 (+)
PWK/PhJ	ENSLUMG00010001839	lncRNA gene	Chr3:143543333-143554431 (+)
SPRET/EiJ	ENSMSPG00010008319	lncRNA gene	Chr3:144830623-144841647 (+)
WSB/EiJ	ENSIUOG00005015584	lncRNA gene	Chr3:144350333-144361464 (+)

Homology

• Gene Tree
  Gm36831
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm36831
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  34
• RefSeq
  1

• Ensembl
  ENSMUSG00000106023 (Evidence)
• NCBI Gene
  102640866

Representative Sequences			Length	Strain/Species
genomic	102640866	NCBI Gene Model | MGI Sequence Detail	9604	C57BL/6J
transcript	XR_376215	RefSeq | MGI Sequence Detail	269	C57BL/6J

References

• Summaries
  All 7

  Diseases 1

  Phenotypes 3
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm36831:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32372	Chr3:147095348-147095356 (+)	34 bp
Tssr32373	Chr3:147095375-147095390 (+)	65 bp