Gm36644 Gene Detail

Summary

• Symbol
  Gm36644
• Name
  predicted gene, 36644

• Feature Type
  lncRNA gene
• IDs
  MGI:5595803
  NCBI Gene: 102640626
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:78304696-78308393 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595803	lncRNA gene	Chr15:78304544-78308899 (-)
129S1/SvImJ	ENSMUSG00200054220	lncRNA gene	Chr15:75413462-75417155 (-)
A/J	ENSMUSG00195051756	lncRNA gene	Chr15:75355767-75359460 (-)
AKR/J	ENSMUSG00220053307	lncRNA gene	Chr15:75399227-75402920 (-)
BALB/cJ	ENSMUSG00180053881	lncRNA gene	Chr15:75232819-75236516 (-)
C3H/HeJ	ENSMUSG00175053329	lncRNA gene	Chr15:75544140-75547833 (-)
C57BL/6NJ	ENSMUSG00215053023	lncRNA gene	Chr15:75313598-75317295 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005048386	lncRNA gene	Chr15:74859889-74863577 (-)
CBA/J	ENSMUSG00210049736	lncRNA gene	Chr15:75319346-75323039 (-)
DBA/2J	ENSMUSG00185051064	lncRNA gene	Chr15:75329146-75332839 (-)
FVB/NJ	ENSMUSG00205051189	lncRNA gene	Chr15:75048956-75052649 (-)
JF1/MsJ	ENSUMUG00000056104	lncRNA gene	Chr15:74907847-74911513 (-)
LP/J	ENSMUSG00230052627	lncRNA gene	Chr15:78661936-78665629 (-)
NOD/ShiLtJ	ENSMUSG00190053543	lncRNA gene	Chr15:75342176-75345869 (-)
NZO/HlLtJ	ENSMUSG00225053787	lncRNA gene	Chr15:78993165-78996854 (-)
PWK/PhJ	ENSLUMG00010052889	lncRNA gene	Chr15:75130316-75133993 (-)
SPRET/EiJ	ENSMSPG00010050389	lncRNA gene	Chr15:76791090-76794425 (-)
WSB/EiJ	ENSIUOG00005050719	lncRNA gene	Chr15:75395540-75399242 (-)

Homology

• Gene Tree
  Gm36644
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm36644
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000115854 (Evidence)
• NCBI Gene
  102640626

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115854	Ensembl Gene Model | MGI Sequence Detail	3698	C57BL/6J
transcript	ENSMUST00000229780	Ensembl | MGI Sequence Detail	343	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;