Gm36640 Gene Detail

Summary

• Symbol
  Gm36640
• Name
  predicted gene, 36640
• Synonyms
  Gm44276

• Feature Type
  lncRNA gene
• IDs
  MGI:5595799
  NCBI Gene: 102640621
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:135256550-135290997 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  1057 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595799	lncRNA gene	Chr6:135229055-135330448 (+)
129S1/SvImJ	ENSMUSG00200034305	lncRNA gene	Chr6:132756466-132823384 (+)
A/J	ENSMUSG00195032492	lncRNA gene	Chr6:131609471-131676440 (+)
AKR/J	ENSMUSG00220042834	lncRNA gene	Chr6:129833909-129900900 (+)
BALB/cJ	ENSMUSG00180039107	lncRNA gene	Chr6:131689285-131755964 (+)
C3H/HeJ	ENSMUSG00175036264	lncRNA gene	Chr6:131629809-131696763 (+)
C57BL/6NJ	ENSMUSG00215033855	lncRNA gene	Chr6:131879540-131953382 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003950	antisense lncRNA gene	Chr6:133272923-133326181 (+)
CAST/EiJ	ENSTCUG00005041216	lncRNA gene	Chr6:132548541-132622262 (+)
CBA/J	ENSMUSG00210016688	lncRNA gene	Chr6:131648229-131715181 (+)
DBA/2J	ENSMUSG00185022835	lncRNA gene	Chr6:132344451-132411416 (+)
FVB/NJ	ENSMUSG00205043534	lncRNA gene	Chr6:130783577-130850386 (+)
JF1/MsJ	ENSUMUG00000045325	lncRNA gene	Chr6:131095884-131169740 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190006787	lncRNA gene	Chr6:132182672-132249639 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010043100	lncRNA gene	Chr6:130150673-130223554 (+)
SPRET/EiJ	ENSMSPG00010035743	lncRNA gene	Chr6:133946229-134014851 (+)
WSB/EiJ	ENSIUOG00005045751	lncRNA gene	Chr6:132451738-132518428 (+)

Homology

• Gene Tree
  Gm36640
  

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000108276 (Evidence)
• NCBI Gene
  102640621

Representative Sequences			Length	Strain/Species
genomic	102640621	NCBI Gene Model | MGI Sequence Detail	34448	C57BL/6J
transcript	BC072574	GenBank | ENA | DDBJ | MGI Sequence Detail	5965	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

Other
Accession IDs

MGI:5690668

References

• Summaries
  All 7
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm36640:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr59290	Chr6:135256652-135256668 (+)	110 bp