Gm36635 Gene Detail

Summary

• Symbol
  Gm36635
• Name
  predicted gene, 36635

• Feature Type
  lncRNA gene
• IDs
  MGI:5595794
  NCBI Gene: 102640612
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:111669516-111671984 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  166 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595794	lncRNA gene	Chr12:111669501-111672673 (+)
129S1/SvImJ	ENSMUSG00200028020	lncRNA gene	Chr12:103447706-103450174 (+)
A/J	ENSMUSG00195046811	lncRNA gene	Chr12:105975910-105978385 (+)
AKR/J	ENSMUSG00220037378	lncRNA gene	Chr12:103863543-103866018 (+)
BALB/cJ	ENSMUSG00180049701	lncRNA gene	Chr12:105210811-105213279 (+)
C3H/HeJ	ENSMUSG00175042165	lncRNA gene	Chr12:107779922-107782397 (+)
C57BL/6NJ	ENSMUSG00215051412	lncRNA gene	Chr12:104483753-104486221 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043524	lncRNA gene	Chr12:103964495-103966970 (+)
CBA/J	ENSMUSG00210041043	lncRNA gene	Chr12:104841328-104843803 (+)
DBA/2J	ENSMUSG00185032071	lncRNA gene	Chr12:106671394-106673869 (+)
FVB/NJ	ENSMUSG00205046516	lncRNA gene	Chr12:103899156-103901631 (+)
JF1/MsJ	ENSUMUG00000025438	lncRNA gene	Chr12:111442806-111445274 (+)
LP/J	ENSMUSG00230044520	lncRNA gene	Chr12:113712282-113714750 (+)
NOD/ShiLtJ	ENSMUSG00190049250	lncRNA gene	Chr12:81334253-81336728 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010048670	lncRNA gene	Chr12:104895634-104898108 (+)
SPRET/EiJ	ENSMSPG00010019869	lncRNA gene	Chr12:107182556-107185027 (+)
WSB/EiJ	ENSIUOG00005039607	lncRNA gene	Chr12:103877093-103879568 (+)

Homology

• Gene Tree
  Gm36635
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000112991 (Evidence)
• NCBI Gene
  102640612

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112991	Ensembl Gene Model | MGI Sequence Detail	2469	C57BL/6J
transcript	ENSMUST00000221152	Ensembl | MGI Sequence Detail	1332	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;