Gm36618 Gene Detail

Summary

• Symbol
  Gm36618
• Name
  predicted gene, 36618

• Feature Type
  lncRNA gene
• IDs
  MGI:5595777
  NCBI Gene: 102640590
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:90800194-90803841 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  304 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595777	lncRNA gene	Chr15:90783964-90806986 (+)
129S1/SvImJ	ENSMUSG00200035839	lncRNA gene	Chr15:87961774-87984928 (+)
A/J	ENSMUSG00195020558	lncRNA gene	Chr15:87857699-87880852 (+)
AKR/J	ENSMUSG00220032379	lncRNA gene	Chr15:87879459-87902862 (+)
BALB/cJ	ENSMUSG00180015660	lncRNA gene	Chr15:87709362-87732761 (+)
C3H/HeJ	ENSMUSG00175028714	lncRNA gene	Chr15:88044142-88067294 (+)
C57BL/6NJ	ENSMUSG00215033270	lncRNA gene	Chr15:87820274-87843401 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030948	lncRNA gene	Chr15:87312511-87335781 (+)
CBA/J	ENSMUSG00210013211	lncRNA gene	Chr15:87813569-87836723 (+)
DBA/2J	ENSMUSG00185022796	lncRNA gene	Chr15:87827478-87850618 (+)
FVB/NJ	ENSMUSG00205038686	lncRNA gene	Chr15:87585970-87609123 (+)
JF1/MsJ	ENSUMUG00000045001	lncRNA gene	Chr15:87369439-87392995 (+)
LP/J	ENSMUSG00230046704	lncRNA gene	Chr15:91184142-91207292 (+)
NOD/ShiLtJ	ENSMUSG00190030542	lncRNA gene	Chr15:87858766-87881918 (+)
NZO/HlLtJ	ENSMUSG00225051190	lncRNA gene	Chr15:91500805-91523955 (+)
PWK/PhJ	ENSLUMG00010034062	lncRNA gene	Chr15:87525280-87548797 (+)
SPRET/EiJ	ENSMSPG00010014367	lncRNA gene	Chr15:89289809-89312861 (+)
WSB/EiJ	ENSIUOG00005011276	lncRNA gene	Chr15:87914073-87937474 (+)

Homology

• Gene Tree
  Gm36618
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm36618
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000116428 (Evidence)
• NCBI Gene
  102640590

Representative Sequences			Length	Strain/Species
genomic	102640590	NCBI Gene Model | MGI Sequence Detail	3648	C57BL/6J
transcript	XR_384341	RefSeq | MGI Sequence Detail	715	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;