Gm36607 Gene Detail

Summary

• Symbol
  Gm36607
• Name
  predicted gene, 36607

• Feature Type
  lncRNA gene
• IDs
  MGI:5595766
  NCBI Gene: 102640576
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:70854271-70881326 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1154 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595766	lncRNA gene	Chr13:70847269-70881326 (+)
129S1/SvImJ	ENSMUSG00200013864	lncRNA gene	Chr13:65218548-65245483 (+)
A/J	ENSMUSG00195030493	lncRNA gene	Chr13:65851398-65878366 (+)
AKR/J	ENSMUSG00220041317	lncRNA gene	Chr13:64440292-64467262 (+)
BALB/cJ	ENSMUSG00180029546	lncRNA gene	Chr13:66349858-66376832 (+)
C3H/HeJ	ENSMUSG00175008809	lncRNA gene	Chr13:66623204-66650181 (+)
C57BL/6NJ	ENSMUSG00215016724	lncRNA gene	Chr13:66381958-66408928 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012036	lncRNA gene	Chr13:65935792-65962873 (+)
CBA/J	ENSMUSG00210009864	lncRNA gene	Chr13:65946077-65973055 (+)
DBA/2J	ENSMUSG00185009049	lncRNA gene	Chr13:69642286-69669260 (+)
FVB/NJ	ENSMUSG00205033503	lncRNA gene	Chr13:65332504-65359482 (+)
JF1/MsJ	ENSUMUG00000038187	lncRNA gene	Chr13:69372477-69399525 (+)
LP/J	ENSMUSG00230034318	lncRNA gene	Chr13:79560424-79587487 (+)
NOD/ShiLtJ	ENSMUSG00190043161	lncRNA gene	Chr13:65963476-65990450 (+)
NZO/HlLtJ	ENSMUSG00225028535	lncRNA gene	Chr13:72050777-72077747 (+)
PWK/PhJ	ENSLUMG00010013316	lncRNA gene	Chr13:65441248-65466965 (+)
SPRET/EiJ	ENSMSPG00010033855	lncRNA gene	Chr13:66343065-66375908 (+)
WSB/EiJ	ENSIUOG00005023526	lncRNA gene	Chr13:64862460-64889347 (+)

Homology

• Gene Tree
  Gm36607
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm36607
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000113794 (Evidence)
• NCBI Gene
  102640576

Representative Sequences			Length	Strain/Species
genomic	102640576	NCBI Gene Model | MGI Sequence Detail	27056	C57BL/6J
transcript	AK039809	GenBank | ENA | DDBJ | MGI Sequence Detail	1088	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69