Gm36602 Gene Detail

Summary

• Symbol
  Gm36602
• Name
  predicted gene, 36602

• Feature Type
  lncRNA gene
• IDs
  MGI:5595761
  NCBI Gene: 102640568
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:46649235-46654606 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  176 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595761	lncRNA gene	Chr19:46647406-46654606 (-)
129S1/SvImJ	ENSMUSG00200021881	lncRNA gene	Chr19:43353100-43360272 (-)
A/J	ENSMUSG00195018205	lncRNA gene	Chr19:43484358-43491534 (-)
AKR/J	ENSMUSG00220019397	lncRNA gene	Chr19:43290094-43297264 (-)
BALB/cJ	ENSMUSG00180021190	lncRNA gene	Chr19:43736434-43743610 (-)
C3H/HeJ	ENSMUSG00175006431	lncRNA gene	Chr19:43282798-43289952 (-)
C57BL/6NJ	ENSMUSG00215005076	lncRNA gene	Chr19:43345249-43352408 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016795	lncRNA gene	Chr19:42942195-42948432 (-)
CBA/J	ENSMUSG00210019192	lncRNA gene	Chr19:43362304-43369458 (-)
DBA/2J	ENSMUSG00185009551	lncRNA gene	Chr19:43859850-43867026 (-)
FVB/NJ	ENSMUSG00205034851	lncRNA gene	Chr19:42777744-42784898 (-)
JF1/MsJ	ENSUMUG00000045041	lncRNA gene	Chr19:44017497-44023766 (-)
LP/J	ENSMUSG00230025946	lncRNA gene	Chr19:44622713-44629885 (-)
NOD/ShiLtJ	ENSMUSG00190005561	lncRNA gene	Chr19:43226870-43234042 (-)
NZO/HlLtJ	ENSMUSG00225044790	lncRNA gene	Chr19:48219574-48226728 (-)
PWK/PhJ	ENSLUMG00010001176	lncRNA gene	Chr19:43183085-43189369 (-)
SPRET/EiJ	ENSMSPG00010007965	lncRNA gene	Chr19:42919341-42926501 (-)
WSB/EiJ	ENSIUOG00005007169	lncRNA gene	Chr19:42732111-42739274 (-)

Homology

• Gene Tree
  Gm36602
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000118040 (Evidence)
• NCBI Gene
  102640568

Representative Sequences			Length	Strain/Species
genomic	102640568	NCBI Gene Model | MGI Sequence Detail	5372	C57BL/6J
transcript	XR_001782663	RefSeq | MGI Sequence Detail	833	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;