Gm36594 Gene Detail

Summary

• Symbol
  Gm36594
• Name
  predicted gene, 36594

• Feature Type
  lncRNA gene
• IDs
  MGI:5595753
  NCBI Gene: 102640559
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:70201625-70231001 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  996 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595753	lncRNA gene	Chr17:70200755-70231045 (-)
129S1/SvImJ	ENSMUSG00200039712	lncRNA gene	Chr17:65549586-65575507 (-)
A/J	ENSMUSG00195018554	lncRNA gene	Chr17:66882895-66913132 (-)
AKR/J	ENSMUSG00220018725	lncRNA gene	Chr17:65947779-65969032 (-)
BALB/cJ	ENSMUSG00180020258	lncRNA gene	Chr17:66619152-66649390 (-)
C3H/HeJ	ENSMUSG00175031069	lncRNA gene	Chr17:65933950-65964187 (-)
C57BL/6NJ	ENSMUSG00215034453	lncRNA gene	Chr17:65615049-65645282 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027560	lncRNA gene	Chr17:66498026-66530145 (-)
CBA/J	ENSMUSG00210030110	lncRNA gene	Chr17:65744384-65774621 (-)
DBA/2J	ENSMUSG00185022901	lncRNA gene	Chr17:68577590-68607827 (-)
FVB/NJ	ENSMUSG00205018661	lncRNA gene	Chr17:66388264-66418499 (-)
JF1/MsJ	ENSUMUG00000039293	lncRNA gene	Chr17:68242544-68278794 (-)
LP/J	ENSMUSG00230016658	lncRNA gene	Chr17:69565234-69591160 (-)
NOD/ShiLtJ	ENSMUSG00190036726	lncRNA gene	Chr17:65710977-65732220 (-)
NZO/HlLtJ	ENSMUSG00225029074	lncRNA gene	Chr17:71840949-71871213 (-)
PWK/PhJ	ENSLUMG00010030217	lncRNA gene	Chr17:65506890-65527580 (-)
SPRET/EiJ	ENSMSPG00010018596	lncRNA gene	Chr17:65857622-65878512 (-)
WSB/EiJ	ENSIUOG00005032415	lncRNA gene	Chr17:66598880-66624820 (-)

Homology

• Gene Tree
  Gm36594
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  57
• RefSeq
  2

• Ensembl
  ENSMUSG00000117233 (Evidence)
• NCBI Gene
  102640559

Representative Sequences			Length	Strain/Species
genomic	102640559	NCBI Gene Model | MGI Sequence Detail	29377	C57BL/6J
transcript	AK048835	GenBank | ENA | DDBJ | MGI Sequence Detail	1451	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;