Gm36551 Gene Detail

Summary

• Symbol
  Gm36551
• Name
  predicted gene, 36551

• Feature Type
  lncRNA gene
• IDs
  MGI:5595710
  NCBI Gene: 102640510
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr5:137854799-137863789 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  382 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595710	lncRNA gene	Chr5:137854799-137898687 (+)
129S1/SvImJ	ENSMUSG00200047340	lncRNA gene	Chr5:131652158-131655431 (+)
A/J	ENSMUSG00195051620	lncRNA gene	Chr5:131153535-131156808 (+)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180045698	lncRNA gene	Chr5:131250115-131253388 (+)
C3H/HeJ	ENSMUSG00175049763	lncRNA gene	Chr5:133177590-133180863 (+)
C57BL/6NJ	ENSMUSG00215049695	lncRNA gene	Chr5:131298940-131302213 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011030	lncRNA gene	Chr5:130523047-130526340 (+)
CAST/EiJ	ENSTCUG00005011215	lncRNA gene	Chr5:130509280-130512551 (+)
CBA/J	ENSMUSG00210024336	lncRNA gene	Chr5:131995164-131998437 (+)
DBA/2J	ENSMUSG00185055374	lncRNA gene	Chr5:135010518-135013791 (+)
FVB/NJ	ENSMUSG00205049646	lncRNA gene	Chr5:130894282-130897555 (+)
JF1/MsJ	ENSUMUG00000054306	lncRNA gene	Chr5:137895667-137898932 (+)
LP/J	ENSMUSG00230049816	lncRNA gene	Chr5:139123962-139127235 (+)
NOD/ShiLtJ	ENSMUSG00190048297	lncRNA gene	Chr5:130949791-130953064 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010019269	lncRNA gene	Chr5:129768942-129772211 (+)
PWK/PhJ	ENSLUMG00010019623	lncRNA gene	Chr5:129755310-129758581 (+)
SPRET/EiJ	ENSMSPG00010041452	lncRNA gene	Chr5:133142397-133144876 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm36551
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36
• RefSeq
  1

• Ensembl
  ENSMUSG00000106478 (Evidence)
• NCBI Gene
  102640510

Representative Sequences			Length	Strain/Species
genomic	102640510	NCBI Gene Model | MGI Sequence Detail	8991	C57BL/6J
transcript	AK036462	GenBank | ENA | DDBJ | MGI Sequence Detail	4150	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm36551:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr49395	Chr5:137855451-137855462 (+)	658 bp
Tssr49396	Chr5:137855480-137855502 (+)	692 bp