Gm36435 Gene Detail

Summary

• Symbol
  Gm36435
• Name
  predicted gene, 36435

• Feature Type
  lncRNA gene
• IDs
  MGI:5595594
  NCBI Gene: 102640351
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:42186075-42191167 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  242 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595594	lncRNA gene	Chr9:42186042-42191260 (-)
129S1/SvImJ	ENSMUSG00200040619	lncRNA gene	Chr9:39260867-39265946 (-)
A/J	ENSMUSG00195049673	lncRNA gene	Chr9:39019122-39024207 (-)
AKR/J	ENSMUSG00220046295	lncRNA gene	Chr9:39108982-39114082 (-)
BALB/cJ	ENSMUSG00180047219	lncRNA gene	Chr9:39130869-39135948 (-)
C3H/HeJ	ENSMUSG00175050207	lncRNA gene	Chr9:39142742-39147823 (-)
C57BL/6NJ	ENSMUSG00215037630	lncRNA gene	Chr9:39104774-39109890 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045420	lncRNA gene	Chr9:39099971-39105081 (-)
CBA/J	ENSMUSG00210048337	lncRNA gene	Chr9:39188529-39193614 (-)
DBA/2J	ENSMUSG00185037981	lncRNA gene	Chr9:39246669-39251766 (-)
FVB/NJ	ENSMUSG00205044571	lncRNA gene	Chr9:39507866-39512939 (-)
JF1/MsJ	ENSUMUG00000051405	lncRNA gene	Chr9:39295192-39300295 (-)
LP/J	ENSMUSG00230034024	lncRNA gene	Chr9:39551569-39556642 (-)
NOD/ShiLtJ	ENSMUSG00190033466	lncRNA gene	Chr9:39336821-39341885 (-)
NZO/HlLtJ	ENSMUSG00225021738	lncRNA gene	Chr9:39518194-39523276 (-)
PWK/PhJ	ENSLUMG00010047639	lncRNA gene	Chr9:39249776-39254872 (-)
SPRET/EiJ	ENSMSPG00010035840	lncRNA gene	Chr9:40020517-40025732 (-)
WSB/EiJ	ENSIUOG00005046918	lncRNA gene	Chr9:38752216-38757303 (-)

Homology

• Gene Tree
  Gm36435
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000111074 (Evidence)
• NCBI Gene
  102640351

Representative Sequences			Length	Strain/Species
genomic	102640351	NCBI Gene Model | MGI Sequence Detail	5093	C57BL/6J
transcript	XR_379308	RefSeq | MGI Sequence Detail	1156	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;