Gm36377 Gene Detail

Summary

• Symbol
  Gm36377
• Name
  predicted gene, 36377

• Feature Type
  lncRNA gene
• IDs
  MGI:5595536
  NCBI Gene: 102640266
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:70798705-70804123 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  333 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595536	lncRNA gene	Chr13:70798705-70804495 (-)
129S1/SvImJ	ENSMUSG00200013941	lncRNA gene	Chr13:65162891-65167662 (-)
A/J	ENSMUSG00195029563	lncRNA gene	Chr13:65796168-65800950 (-)
AKR/J	ENSMUSG00220038384	lncRNA gene	Chr13:64385052-64389834 (-)
BALB/cJ	ENSMUSG00180029817	lncRNA gene	Chr13:66294620-66299402 (-)
C3H/HeJ	ENSMUSG00175008593	lncRNA gene	Chr13:66567977-66572759 (-)
C57BL/6NJ	ENSMUSG00215015169	lncRNA gene	Chr13:66326730-66331512 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011962	lncRNA gene	Chr13:65879704-65885033 (-)
CBA/J	ENSMUSG00210009891	lncRNA gene	Chr13:65890856-65895638 (-)
DBA/2J	ENSMUSG00185009341	lncRNA gene	Chr13:69587058-69591840 (-)
FVB/NJ	ENSMUSG00205028684	lncRNA gene	Chr13:65277295-65282077 (-)
JF1/MsJ	ENSUMUG00000035723	lncRNA gene	Chr13:69316342-69321126 (-)
LP/J	ENSMUSG00230033931	lncRNA gene	Chr13:79505375-79510135 (-)
NOD/ShiLtJ	ENSMUSG00190039130	lncRNA gene	Chr13:65908267-65913049 (-)
NZO/HlLtJ	ENSMUSG00225028565	lncRNA gene	Chr13:71995552-72000334 (-)
PWK/PhJ	ENSLUMG00010012920	lncRNA gene	Chr13:65385102-65389887 (-)
SPRET/EiJ	ENSMSPG00010032099	lncRNA gene	Chr13:66286730-66291527 (-)
WSB/EiJ	ENSIUOG00005022777	lncRNA gene	Chr13:64805058-64809828 (-)

Homology

• Gene Tree
  Gm36377
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm36377
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000113909 (Evidence)
• NCBI Gene
  102640266

Representative Sequences			Length	Strain/Species
genomic	102640266	NCBI Gene Model | MGI Sequence Detail	5419	C57BL/6J
transcript	XR_873650	RefSeq | MGI Sequence Detail	1468	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69