Gm36329 Gene Detail

Summary

• Symbol
  Gm36329
• Name
  predicted gene, 36329

• Feature Type
  lncRNA gene
• IDs
  MGI:5595488
  NCBI Gene: 102640206
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:77601836-77607174 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  149 from dbSNP Build 142
• Strain Annotations
  27

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595488	lncRNA gene	Chr15:77599304-77607205 (-)
129S1/SvImJ	ENSMUSG00200054279	lncRNA gene	Chr15:74417208-74422356 (+)
129S1/SvImJ	ENSMUSG00200054156	lncRNA gene	Chr15:74717134-74722349 (-)
A/J	ENSMUSG00195051785	lncRNA gene	Chr15:74659386-74664597 (-)
A/J	ENSMUSG00195052490	lncRNA gene	Chr15:74376164-74381353 (+)
AKR/J	ENSMUSG00220053417	lncRNA gene	Chr15:74402994-74408141 (+)
AKR/J	ENSMUSG00220053130	lncRNA gene	Chr15:74702919-74708133 (-)
BALB/cJ	ENSMUSG00180053863	lncRNA gene	Chr15:74536465-74541676 (-)
C3H/HeJ	ENSMUSG00175053570	lncRNA gene	Chr15:74564690-74569885 (+)
C3H/HeJ	ENSMUSG00175052894	lncRNA gene	Chr15:74847857-74853068 (-)
C57BL/6NJ	ENSMUSG00215053685	lncRNA gene	Chr15:74309100-74314250 (+)
C57BL/6NJ	ENSMUSG00215052796	lncRNA gene	Chr15:74609050-74614261 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005047776	lncRNA gene	Chr15:73918332-73923555 (+)
CBA/J	ENSMUSG00210050237	lncRNA gene	Chr15:74339891-74345080 (+)
CBA/J	ENSMUSG00210048892	lncRNA gene	Chr15:74623083-74628294 (-)
DBA/2J	ENSMUSG00185050906	lncRNA gene	Chr15:74632475-74637686 (-)
DBA/2J	ENSMUSG00185052677	lncRNA gene	Chr15:74332553-74337701 (+)
FVB/NJ	ENSMUSG00205051749	lncRNA gene	Chr15:74352574-74357787 (-)
FVB/NJ	ENSMUSG00205053000	lncRNA gene	Chr15:74069443-74074632 (+)
JF1/MsJ	ENSUMUG00000056244	lncRNA gene	Chr15:73986663-73991847 (+)
LP/J	ENSMUSG00230053033	lncRNA gene	Chr15:77682551-77687740 (+)
LP/J	ENSMUSG00230052808	lncRNA gene	Chr15:77965687-77970898 (-)
NOD/ShiLtJ	ENSMUSG00190053378	lncRNA gene	Chr15:74636394-74641578 (-)
NZO/HlLtJ	ENSMUSG00225054205	lncRNA gene	Chr15:78287261-78292487 (-)
NZO/HlLtJ	ENSMUSG00225054262	lncRNA gene	Chr15:77999009-78004193 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010050262	lncRNA gene	Chr15:75899842-75905094 (+)
WSB/EiJ	ENSIUOG00005050230	lncRNA gene	Chr15:74681829-74687059 (-)

Homology

• Gene Tree
  Gm36329
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm36329
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  33
• RefSeq
  1

• Ensembl
  ENSMUSG00000116162 (Evidence)
• NCBI Gene
  102640206

Representative Sequences			Length	Strain/Species
genomic	102640206	NCBI Gene Model | MGI Sequence Detail	5339	C57BL/6J
transcript	XR_001781707	RefSeq | MGI Sequence Detail	853	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17