Gm36315 Gene Detail

Summary

• Symbol
  Gm36315
• Name
  predicted gene, 36315

• Feature Type
  lncRNA gene
• IDs
  MGI:5595474
  NCBI Gene: 102640187
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr18:36021822-36022921 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  64 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595474	lncRNA gene	Chr18:36021822-36023390 (-)
129S1/SvImJ	ENSMUSG00200044421	lncRNA gene	Chr18:33020688-33022256 (-)
A/J	ENSMUSG00195037358	lncRNA gene	Chr18:33187696-33189264 (-)
AKR/J	ENSMUSG00220017367	lncRNA gene	Chr18:33163721-33165289 (-)
BALB/cJ	ENSMUSG00180023234	lncRNA gene	Chr18:33637338-33638906 (-)
C3H/HeJ	ENSMUSG00175039251	lncRNA gene	Chr18:33144523-33146091 (-)
C57BL/6NJ	ENSMUSG00215031595	lncRNA gene	Chr18:32890794-32892362 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025586	lncRNA gene	Chr18:32799677-32801248 (-)
CBA/J	ENSMUSG00210021841	lncRNA gene	Chr18:33179472-33181040 (-)
DBA/2J	ENSMUSG00185021247	lncRNA gene	Chr18:33114035-33115604 (-)
FVB/NJ	ENSMUSG00205037425	lncRNA gene	Chr18:32825580-32827148 (-)
JF1/MsJ	ENSUMUG00000047083	lncRNA gene	Chr18:33271913-33273483 (-)
LP/J	ENSMUSG00230049382	lncRNA gene	Chr18:35217464-35219032 (-)
NOD/ShiLtJ	ENSMUSG00190022571	lncRNA gene	Chr18:32898334-32899902 (-)
NZO/HlLtJ	ENSMUSG00225046957	lncRNA gene	Chr18:35122277-35123845 (-)
PWK/PhJ	ENSLUMG00010013650	lncRNA gene	Chr18:33422449-33424019 (-)
SPRET/EiJ	ENSMSPG00010023017	lncRNA gene	Chr18:33471978-33473549 (-)
WSB/EiJ	ENSIUOG00005007883	lncRNA gene	Chr18:32885249-32886818 (-)

Homology

• Gene Tree
  Gm36315
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000118358 (Evidence)
• NCBI Gene
  102640187

Representative Sequences			Length	Strain/Species
genomic	102640187	NCBI Gene Model | MGI Sequence Detail	1100	C57BL/6J
transcript	XR_386163	RefSeq | MGI Sequence Detail	992	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm36315:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr152919	Chr18:36022844-36022855 (-)	71 bp