Gm36263 Gene Detail

Summary

• Symbol
  Gm36263
• Name
  predicted gene, 36263

• Feature Type
  lncRNA gene
• IDs
  MGI:5595422
  NCBI Gene: 102640116
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr12:100141110-100147432 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  230 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595422	lncRNA gene	Chr12:100130334-100147432 (-)
129S1/SvImJ	ENSMUSG00200017991	lncRNA gene	Chr12:91917367-91920415 (-)
A/J	ENSMUSG00195022785	lncRNA gene	Chr12:94479226-94482264 (-)
AKR/J	ENSMUSG00220017887	lncRNA gene	Chr12:92371488-92374523 (-)
BALB/cJ	ENSMUSG00180039156	lncRNA gene	Chr12:93630405-93633441 (-)
C3H/HeJ	ENSMUSG00175034501	lncRNA gene	Chr12:96292220-96295258 (-)
C57BL/6NJ	ENSMUSG00215042190	lncRNA gene	Chr12:92941646-92944681 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006249	lncRNA gene	Chr12:92588870-92591847 (-)
CBA/J	ENSMUSG00210014962	lncRNA gene	Chr12:93289312-93292348 (-)
DBA/2J	ENSMUSG00185048008	lncRNA gene	Chr12:95078728-95081767 (-)
FVB/NJ	ENSMUSG00205019395	lncRNA gene	Chr12:92454095-92457111 (-)
JF1/MsJ	ENSUMUG00000025751	lncRNA gene	Chr12:99806490-99809507 (-)
LP/J	ENSMUSG00230004813	lncRNA gene	Chr12:102182497-102185545 (-)
NOD/ShiLtJ	ENSMUSG00190005208	lncRNA gene	Chr12:92854756-92857792 (+)
NZO/HlLtJ	ENSMUSG00225033771	lncRNA gene	Chr12:103899417-103902450 (-)
PWK/PhJ	ENSLUMG00010014187	lncRNA gene	Chr12:93292755-93295775 (-)
SPRET/EiJ	ENSMSPG00010020309	lncRNA gene	Chr12:95725936-95728939 (-)
WSB/EiJ	ENSIUOG00005002202	lncRNA gene	Chr12:92277798-92280841 (-)

Homology

• Gene Tree
  Gm36263
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm36263
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  50
• RefSeq
  5

• Ensembl
  ENSMUSG00000120699 (Evidence)
• NCBI Gene
  102640116

Representative Sequences			Length	Strain/Species
genomic	102640116	NCBI Gene Model | MGI Sequence Detail	6323	C57BL/6J
transcript	XR_001780534	RefSeq | MGI Sequence Detail	919	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm36263:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr117316	Chr12:100147212-100147235 (-)	208 bp
Tssr117315	Chr12:100145269-100145270 (-)	2,162 bp