Gm36231 Gene Detail

Summary

• Symbol
  Gm36231
• Name
  predicted gene, 36231
• Synonyms
  Gm45622

• Feature Type
  lncRNA gene
• IDs
  MGI:5595390
  NCBI Gene: 102640076
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:68649119-68675806 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  799 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595390	lncRNA gene	Chr2:68649119-68687298 (-)
129S1/SvImJ	ENSMUSG00200037045	lncRNA gene	Chr2:65702966-65727886 (-)
A/J	ENSMUSG00195023519	lncRNA gene	Chr2:65848160-65873101 (-)
AKR/J	ENSMUSG00220041013	lncRNA gene	Chr2:65815272-65840223 (-)
BALB/cJ	ENSMUSG00180042704	lncRNA gene	Chr2:65807003-65831945 (-)
C3H/HeJ	ENSMUSG00175037894	lncRNA gene	Chr2:65915249-65940154 (-)
C57BL/6NJ	ENSMUSG00215032485	lncRNA gene	Chr2:65746309-65771252 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009408	lncRNA gene	Chr2:65210179-65233005 (-)
CBA/J	ENSMUSG00210038935	lncRNA gene	Chr2:65955537-65980441 (-)
DBA/2J	ENSMUSG00185041300	lncRNA gene	Chr2:65806489-65828526 (-)
FVB/NJ	ENSMUSG00205039661	lncRNA gene	Chr2:65263112-65288059 (-)
JF1/MsJ	ENSUMUG00000007462	lncRNA gene	Chr2:65468196-65490405 (-)
LP/J	ENSMUSG00230023294	lncRNA gene	Chr2:67607796-67632741 (-)
NOD/ShiLtJ	ENSMUSG00190042483	lncRNA gene	Chr2:65885430-65910333 (-)
NZO/HlLtJ	ENSMUSG00225015465	lncRNA gene	Chr2:75344439-75369381 (-)
PWK/PhJ	ENSLUMG00010035100	lncRNA gene	Chr2:65682611-65704893 (-)
SPRET/EiJ	ENSMSPG00010037560	lncRNA gene	Chr2:67034368-67057803 (-)
WSB/EiJ	ENSIUOG00005019732	lncRNA gene	Chr2:65933577-65958579 (-)

Homology

• Gene Tree
  Gm36231
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm36231
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  3

• Ensembl
  ENSMUSG00000109667 (Evidence)
• NCBI Gene
  102640076

Representative Sequences			Length	Strain/Species
genomic	102640076	NCBI Gene Model | MGI Sequence Detail	26688	C57BL/6J
transcript	XR_866394	RefSeq | MGI Sequence Detail	1996	C57BL/6J

Other
Accession IDs

MGI:5791458

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;