Gm36185 Gene Detail

Summary

• Symbol
  Gm36185
• Name
  predicted gene, 36185

• Feature Type
  lncRNA gene
• IDs
  MGI:5595344
  NCBI Gene: 102640009
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr5:116056690-116060242 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  231 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595344	lncRNA gene	Chr5:116056690-116062864 (-)
129S1/SvImJ	ENSMUSG00200023746	lncRNA gene	Chr5:109797364-109800895 (-)
A/J	ENSMUSG00195041346	lncRNA gene	Chr5:109318009-109321553 (-)
AKR/J	ENSMUSG00220052010	lncRNA gene	Chr5:108827116-108830647 (-)
BALB/cJ	ENSMUSG00180047924	lncRNA gene	Chr5:109448136-109451667 (-)
C3H/HeJ	ENSMUSG00175048898	lncRNA gene	Chr5:111435555-111439094 (-)
C57BL/6NJ	ENSMUSG00215039508	lncRNA gene	Chr5:109458117-109461656 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034068	lncRNA gene	Chr5:108639701-108643256 (-)
CBA/J	ENSMUSG00210047561	lncRNA gene	Chr5:110186605-110190144 (-)
DBA/2J	ENSMUSG00185054187	lncRNA gene	Chr5:113246377-113249908 (-)
FVB/NJ	ENSMUSG00205053124	lncRNA gene	Chr5:109086870-109090411 (-)
JF1/MsJ	ENSUMUG00000054190	lncRNA gene	Chr5:116070337-116073871 (-)
LP/J	ENSMUSG00230049320	lncRNA gene	Chr5:117335506-117339037 (-)
NOD/ShiLtJ	ENSMUSG00190049424	lncRNA gene	Chr5:109122564-109126108 (-)
NZO/HlLtJ	ENSMUSG00225016354	lncRNA gene	Chr5:124995791-124999322 (-)
PWK/PhJ	ENSLUMG00010041595	lncRNA gene	Chr5:107963929-107967465 (-)
SPRET/EiJ	ENSMSPG00010045040	lncRNA gene	Chr5:111255974-111259512 (-)
WSB/EiJ	ENSIUOG00005046990	lncRNA gene	Chr5:111828012-111831542 (-)

Homology

• Gene Tree
  Gm36185
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm36185
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  2

• Ensembl
  ENSMUSG00000120953 (Evidence)
• NCBI Gene
  102640009

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000120953	Ensembl Gene Model | MGI Sequence Detail	3553	C57BL/6J
transcript	ENSMUST00000246923	Ensembl | MGI Sequence Detail	1144	Not Applicable

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17

TSS for Gm36185:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr52829	Chr5:116060215-116060240 (-)	14 bp