Gm36159 Gene Detail

Summary

• Symbol
  Gm36159
• Name
  predicted gene, 36159
• Synonyms
  Gm44512

• Feature Type
  lncRNA gene
• IDs
  MGI:5595318
  NCBI Gene: 102639971
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr7:24147741-24150760 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  224 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5595318	lncRNA gene	Chr7:24146997-24150760 (+)
129S1/SvImJ	ENSMUSG00200046797	lncRNA gene	Chr7:14150701-14153673 (+)
A/J	ENSMUSG00195054056	lncRNA gene	Chr7:16587477-16590441 (+)
AKR/J	ENSMUSG00220053602	lncRNA gene	Chr7:27800077-27803050 (-)
BALB/cJ	ENSMUSG00180054296	lncRNA gene	Chr7:14659473-14662435 (+)
C3H/HeJ	ENSMUSG00175053302	lncRNA gene	Chr7:15709362-15712334 (+)
C57BL/6NJ	ENSMUSG00215054896	lncRNA gene	Chr7:14063512-14066485 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006488	lincRNA gene	Chr7:23721627-23724648 (+)
CAST/EiJ	ENSTCUG00005052578	lncRNA gene	Chr7:15748423-15760113 (+)
CBA/J	ENSMUSG00210053727	lncRNA gene	Chr7:14895110-14898082 (+)
DBA/2J	ENSMUSG00185055501	lncRNA gene	Chr7:18103256-18106220 (+)
FVB/NJ	ENSMUSG00205052496	lncRNA gene	Chr7:14899990-14902963 (+)
JF1/MsJ	ENSUMUG00000057379	lncRNA gene	Chr7:22404960-22407928 (+)
LP/J	ENSMUSG00230053768	lncRNA gene	Chr7:23377070-23380042 (+)
NOD/ShiLtJ	ENSMUSG00190052851	lncRNA gene	Chr7:14376829-14379801 (+)
NZO/HlLtJ	ENSMUSG00225027188	lncRNA gene	Chr7:22045084-22048048 (+)
PWK/PhJ	ENSLUMG00010051310	lncRNA gene	Chr7:14338796-14341807 (+)
SPRET/EiJ	ENSMSPG00010051320	lncRNA gene	Chr7:14000365-14003390 (+)
WSB/EiJ	ENSIUOG00005052753	lncRNA gene	Chr7:8836179-8839133 (+)

Homology

• Gene Tree
  Gm36159
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000108360 (Evidence)
• NCBI Gene
  102639971

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108360	Ensembl Gene Model | MGI Sequence Detail	3020	C57BL/6J
transcript	ENSMUST00000286642	Ensembl | MGI Sequence Detail	566	Not Applicable

Other
Accession IDs

MGI:5753088

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Gm36159:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr64969	Chr7:24150201-24150229 (+)	2,474 bp
Tssr2129	Chr7:24150266-24150272 (+)	2,528 bp