Gm35772 Gene Detail

Summary

• Symbol
  Gm35772
• Name
  predicted gene, 35772

• Feature Type
  lncRNA gene
• IDs
  MGI:5594931
  NCBI Gene: 102639465
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:87955334-87959112 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  305 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594931	lncRNA gene	Chr15:87955286-87978085 (+)
129S1/SvImJ	ENSMUSG00200036278	lncRNA gene	Chr15:85100557-85101691 (+)
A/J	ENSMUSG00195020492	lncRNA gene	Chr15:85022157-85023291 (+)
AKR/J	ENSMUSG00220031288	lncRNA gene	Chr15:85060131-85061265 (+)
BALB/cJ	ENSMUSG00180015140	lncRNA gene	Chr15:84876095-84877229 (+)
C3H/HeJ	ENSMUSG00175028518	lncRNA gene	Chr15:85208934-85210068 (+)
C57BL/6NJ	ENSMUSG00215030285	lncRNA gene	Chr15:84978719-84979853 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031080	lncRNA gene	Chr15:84483380-84484583 (+)
CBA/J	ENSMUSG00210013170	lncRNA gene	Chr15:84978428-84979562 (+)
DBA/2J	ENSMUSG00185022392	lncRNA gene	Chr15:84990254-84991388 (+)
FVB/NJ	ENSMUSG00205036752	lncRNA gene	Chr15:84746223-84747357 (+)
JF1/MsJ	ENSUMUG00000043258	lncRNA gene	Chr15:84545525-84546657 (+)
LP/J	ENSMUSG00230045429	lncRNA gene	Chr15:88340903-88342037 (+)
NOD/ShiLtJ	ENSMUSG00190030125	lncRNA gene	Chr15:85001856-85002990 (+)
NZO/HlLtJ	ENSMUSG00225051040	lncRNA gene	Chr15:88664825-88665959 (+)
PWK/PhJ	ENSLUMG00010036463	lncRNA gene	Chr15:84714693-84715839 (+)
SPRET/EiJ	ENSMSPG00010014996	lncRNA gene	Chr15:86419407-86420540 (+)
WSB/EiJ	ENSIUOG00005011500	lncRNA gene	Chr15:85070412-85071546 (+)

Homology

• Gene Tree
  Gm35772
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35772
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000116350 (Evidence)
• NCBI Gene
  102639465

Representative Sequences			Length	Strain/Species
genomic	102639465	NCBI Gene Model | MGI Sequence Detail	3779	C57BL/6J
transcript	XR_384326	RefSeq | MGI Sequence Detail	376	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;