Gm35733 Gene Detail

Summary

• Symbol
  Gm35733
• Name
  predicted gene, 35733

• Feature Type
  lncRNA gene
• IDs
  MGI:5594892
  NCBI Gene: 102639410
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:47592156-47592815 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594892	lncRNA gene	Chr13:47477722-47614136 (+)
129S1/SvImJ	ENSMUSG00200036596	lncRNA gene	Chr13:44772753-44850877 (+)
A/J	ENSMUSG00195031288	lncRNA gene	Chr13:43827848-43905991 (+)
AKR/J	ENSMUSG00220010001	lncRNA gene	Chr13:43634907-43713096 (+)
BALB/cJ	ENSMUSG00180009081	lncRNA gene	Chr13:44130191-44208319 (+)
C3H/HeJ	ENSMUSG00175029968	lncRNA gene	Chr13:44094354-44172481 (+)
C57BL/6NJ	ENSMUSG00215007963	lncRNA gene	Chr13:44259981-44338166 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031673	lncRNA gene	Chr13:44166216-44252069 (+)
CBA/J	ENSMUSG00210028622	lncRNA gene	Chr13:44099864-44177986 (+)
DBA/2J	ENSMUSG00185032997	lncRNA gene	Chr13:44919939-44998057 (+)
FVB/NJ	ENSMUSG00205012158	lncRNA gene	Chr13:43886056-43964190 (+)
JF1/MsJ	ENSUMUG00000017203	lncRNA gene	Chr13:44447817-44534061 (+)
LP/J	ENSMUSG00230030865	lncRNA gene	Chr13:54235809-54313935 (+)
NOD/ShiLtJ	ENSMUSG00190012620	lncRNA gene	Chr13:44318568-44396692 (+)
NZO/HlLtJ	ENSMUSG00225036434	lncRNA gene	Chr13:48009651-48087766 (+)
PWK/PhJ	ENSLUMG00010022533	lncRNA gene	Chr13:43285342-43363537 (+)
SPRET/EiJ	ENSMSPG00010031871	lncRNA gene	Chr13:43400727-43486816 (+)
WSB/EiJ	ENSIUOG00005029344	lncRNA gene	Chr13:43472073-43550161 (+)

Homology

• Gene Tree
  Gm35733
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35733
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000114843 (Evidence)
• NCBI Gene
  102639410

Representative Sequences			Length	Strain/Species
genomic	102639410	NCBI Gene Model | MGI Sequence Detail	660	C57BL/6J
transcript	XR_873358	RefSeq | MGI Sequence Detail	280	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69