Gm35618 Gene Detail

Summary

• Symbol
  Gm35618
• Name
  predicted gene, 35618

• Feature Type
  lncRNA gene
• IDs
  MGI:5594777
  NCBI Gene: 102639267
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:69828550-69845901 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  816 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594777	lncRNA gene	Chr13:69794583-69845901 (-)
129S1/SvImJ	ENSMUSG00200013313	lncRNA gene	Chr13:64190831-64208107 (-)
A/J	ENSMUSG00195031858	lncRNA gene	Chr13:64811925-64829190 (-)
AKR/J	ENSMUSG00220038033	lncRNA gene	Chr13:63387138-63404401 (-)
BALB/cJ	ENSMUSG00180028135	lncRNA gene	Chr13:65296949-65314216 (-)
C3H/HeJ	ENSMUSG00175009077	lncRNA gene	Chr13:65598054-65615317 (-)
C57BL/6NJ	ENSMUSG00215019585	lncRNA gene	Chr13:65355311-65372402 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011926	lncRNA gene	Chr13:64933746-64951153 (-)
CBA/J	ENSMUSG00210009679	lncRNA gene	Chr13:64920912-64938175 (-)
DBA/2J	ENSMUSG00185009174	lncRNA gene	Chr13:68617182-68634445 (-)
FVB/NJ	ENSMUSG00205032078	lncRNA gene	Chr13:64295977-64313241 (-)
JF1/MsJ	ENSUMUG00000033043	lncRNA gene	Chr13:68350859-68367946 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190045047	lncRNA gene	Chr13:64924246-64941470 (-)
NZO/HlLtJ	ENSMUSG00225048025	lncRNA gene	Chr13:71025732-71042995 (-)
PWK/PhJ	ENSLUMG00010013023	lncRNA gene	Chr13:64404826-64422123 (-)
SPRET/EiJ	ENSMSPG00010033129	lncRNA gene	Chr13:65312580-65329679 (-)
WSB/EiJ	ENSIUOG00005024075	lncRNA gene	Chr13:63813968-63831228 (-)

Homology

• Gene Tree
  Gm35618
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35618
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  33
• RefSeq
  2

• Ensembl
  ENSMUSG00000113299 (Evidence)
• NCBI Gene
  102639267

Representative Sequences			Length	Strain/Species
genomic	102639267	NCBI Gene Model | MGI Sequence Detail	17352	C57BL/6J
transcript	AK133439	GenBank | ENA | DDBJ | MGI Sequence Detail	1608	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69