Gm35610 Gene Detail

Summary

• Symbol
  Gm35610
• Name
  predicted gene, 35610

• Feature Type
  lncRNA gene
• IDs
  MGI:5594769
  NCBI Gene: 102639257
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:44729230-44731150 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594769	lncRNA gene	Chr19:44728318-44731883 (+)
129S1/SvImJ	ENSMUSG00200021720	lncRNA gene	Chr19:41443036-41446579 (+)
A/J	ENSMUSG00195017512	lncRNA gene	Chr19:41576441-41579993 (+)
AKR/J	ENSMUSG00220019815	lncRNA gene	Chr19:41370841-41374387 (+)
BALB/cJ	ENSMUSG00180022707	lncRNA gene	Chr19:41828800-41832357 (+)
C3H/HeJ	ENSMUSG00175006581	lncRNA gene	Chr19:41359645-41363200 (+)
C57BL/6NJ	ENSMUSG00215005257	lncRNA gene	Chr19:41418643-41422216 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016949	lncRNA gene	Chr19:41013226-41016800 (+)
CBA/J	ENSMUSG00210019376	lncRNA gene	Chr19:41439289-41442847 (+)
DBA/2J	ENSMUSG00185009063	lncRNA gene	Chr19:41952444-41955999 (+)
FVB/NJ	ENSMUSG00205039439	lncRNA gene	Chr19:40866755-40870304 (+)
JF1/MsJ	ENSUMUG00000046071	lncRNA gene	Chr19:42096235-42099827 (+)
LP/J	ENSMUSG00230025510	lncRNA gene	Chr19:42712936-42716479 (+)
NOD/ShiLtJ	ENSMUSG00190005718	lncRNA gene	Chr19:41308243-41311788 (+)
NZO/HlLtJ	ENSMUSG00225044568	lncRNA gene	Chr19:46307297-46310836 (+)
PWK/PhJ	ENSLUMG00010001307	lncRNA gene	Chr19:41260630-41264225 (+)
SPRET/EiJ	ENSMSPG00010007717	lncRNA gene	Chr19:41005176-41008750 (+)
WSB/EiJ	ENSIUOG00005006762	lncRNA gene	Chr19:40813177-40816756 (+)

Homology

• Gene Tree
  Gm35610
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  5

• Ensembl
  ENSMUSG00000117823 (Evidence)
• NCBI Gene
  102639257

Representative Sequences			Length	Strain/Species
genomic	102639257	NCBI Gene Model | MGI Sequence Detail	1921	C57BL/6J
transcript	XR_386743	RefSeq | MGI Sequence Detail	1398	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14