Gm35608 Gene Detail

Summary

• Symbol
  Gm35608
• Name
  predicted gene, 35608

• Feature Type
  lncRNA gene
• IDs
  MGI:5594767
  NCBI Gene: 102639255
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:76520266-76522635 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  260 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594767	lncRNA gene	Chr10:76513556-76522637 (+)
129S1/SvImJ	ENSMUSG00200051245	lncRNA gene	Chr10:73197771-73200140 (+)
A/J	ENSMUSG00195050445	lncRNA gene	Chr10:73534363-73536732 (+)
AKR/J	ENSMUSG00220049524	lncRNA gene	Chr10:73194083-73196452 (+)
BALB/cJ	ENSMUSG00180053072	lncRNA gene	Chr10:73548836-73551205 (+)
C3H/HeJ	ENSMUSG00175052403	lncRNA gene	Chr10:73420081-73422450 (+)
C57BL/6NJ	ENSMUSG00215053483	lncRNA gene	Chr10:73157746-73160115 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052089	lncRNA gene	Chr10:73048651-73051020 (+)
CBA/J	ENSMUSG00210050327	lncRNA gene	Chr10:73276290-73278659 (+)
DBA/2J	ENSMUSG00185053716	lncRNA gene	Chr10:73618578-73620947 (+)
FVB/NJ	ENSMUSG00205052047	lncRNA gene	Chr10:73310520-73312889 (+)
JF1/MsJ	ENSUMUG00000056289	lncRNA gene	Chr10:74772892-74775263 (+)
LP/J	ENSMUSG00230051224	lncRNA gene	Chr10:75388127-75390496 (+)
NOD/ShiLtJ	ENSMUSG00190052079	lncRNA gene	Chr10:73596064-73598433 (+)
NZO/HlLtJ	ENSMUSG00225048077	lncRNA gene	Chr10:79684784-79687153 (+)
PWK/PhJ	ENSLUMG00010052749	lncRNA gene	Chr10:73161019-73163389 (+)
SPRET/EiJ	ENSMSPG00010048642	lncRNA gene	Chr10:74951104-74953463 (+)
WSB/EiJ	ENSIUOG00005051568	lncRNA gene	Chr10:73202177-73204548 (+)

Homology

• Gene Tree
  Gm35608
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35608
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000112721 (Evidence)
• NCBI Gene
  102639255

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112721	Ensembl Gene Model | MGI Sequence Detail	2370	C57BL/6J
transcript	ENSMUST00000218472	Ensembl | MGI Sequence Detail	2370	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87