Gm35584 Gene Detail

Summary

• Symbol
  Gm35584
• Name
  predicted gene, 35584

• Feature Type
  lncRNA gene
• IDs
  MGI:5594743
  NCBI Gene: 102639225
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr3:68668828-68670006 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  177 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594743	lncRNA gene	Chr3:68668262-68670008 (+)
129S1/SvImJ	ENSMUSG00200001588	lncRNA gene	Chr3:65434683-65435855 (+)
A/J	ENSMUSG00195027114	lncRNA gene	Chr3:65546526-65547698 (+)
AKR/J	ENSMUSG00220024893	lncRNA gene	Chr3:65533242-65534414 (+)
BALB/cJ	ENSMUSG00180008400	lncRNA gene	Chr3:65609355-65610527 (+)
C3H/HeJ	ENSMUSG00175003576	lncRNA gene	Chr3:65454156-65455328 (+)
C57BL/6NJ	ENSMUSG00215006985	lncRNA gene	Chr3:65884451-65885623 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005643	lincRNA gene	Chr3:62223685-62224847 (+)
CAST/EiJ	ENSTCUG00005022549	lncRNA gene	Chr3:65058106-65059266 (+)
CBA/J	ENSMUSG00210002324	lncRNA gene	Chr3:65543447-65544619 (+)
DBA/2J	ENSMUSG00185015498	lncRNA gene	Chr3:65698398-65699570 (+)
FVB/NJ	ENSMUSG00205009542	lncRNA gene	Chr3:64604099-64605272 (+)
JF1/MsJ	ENSUMUG00000001599	lncRNA gene	Chr3:65285373-65286544 (+)
LP/J	ENSMUSG00230002336	lncRNA gene	Chr3:67721567-67722739 (+)
NOD/ShiLtJ	ENSMUSG00190003237	lncRNA gene	Chr3:66000588-66001760 (+)
NZO/HlLtJ	ENSMUSG00225002402	lncRNA gene	Chr3:70419586-70420758 (+)
PWK/PhJ	ENSLUMG00010015232	lncRNA gene	Chr3:65364683-65365851 (+)
SPRET/EiJ	ENSMSPG00010008154	lncRNA gene	Chr3:65869255-65870423 (+)
WSB/EiJ	ENSIUOG00005016168	lncRNA gene	Chr3:65916333-65917505 (+)

Homology

• Gene Tree
  Gm35584
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm35584
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  1

• Ensembl
  ENSMUSG00000102936 (Evidence)
• NCBI Gene
  102639225

Representative Sequences			Length	Strain/Species
genomic	102639225	NCBI Gene Model | MGI Sequence Detail	1179	C57BL/6J
transcript	NR_153374	RefSeq | MGI Sequence Detail	647	ZRU/MplStud

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm35584:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr29495	Chr3:68668763-68668788 (+)	-52 bp
Tssr29496	Chr3:68668803-68668813 (+)	-20 bp
Tssr29497	Chr3:68669379-68669414 (+)	569 bp