Gm35576 Gene Detail

Summary

• Symbol
  Gm35576
• Name
  predicted gene, 35576

• Feature Type
  lncRNA gene
• IDs
  MGI:5594735
  NCBI Gene: 102639216
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:15502924-15505686 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  206 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594735	lncRNA gene	Chr17:15451843-15505736 (-)
129S1/SvImJ	ENSMUSG00200039376	lncRNA gene	Chr17:11093901-11116550 (-)
A/J	ENSMUSG00195038710	lncRNA gene	Chr17:11851299-11873956 (-)
AKR/J	ENSMUSG00220026817	lncRNA gene	Chr17:11512557-11535214 (-)
BALB/cJ	ENSMUSG00180020046	lncRNA gene	Chr17:11091737-11114395 (-)
C3H/HeJ	ENSMUSG00175043831	lncRNA gene	Chr17:10985335-11007998 (-)
C57BL/6NJ	ENSMUSG00215043009	lncRNA gene	Chr17:11191759-11214410 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023385	lncRNA gene	Chr17:11516412-11538828 (-)
CBA/J	ENSMUSG00210044369	lncRNA gene	Chr17:10829488-10852130 (-)
DBA/2J	ENSMUSG00185042220	lncRNA gene	Chr17:12819950-12842604 (-)
FVB/NJ	ENSMUSG00205037826	lncRNA gene	Chr17:11502732-11525371 (-)
JF1/MsJ	ENSUMUG00000039905	lncRNA gene	Chr17:12388631-12408971 (-)
LP/J	ENSMUSG00230027793	lncRNA gene	Chr17:14218202-14240852 (-)
NOD/ShiLtJ	ENSMUSG00190043075	lncRNA gene	Chr17:11252056-11274693 (-)
NZO/HlLtJ	ENSMUSG00225048373	lncRNA gene	Chr17:16171793-16194442 (-)
PWK/PhJ	ENSLUMG00010020381	lncRNA gene	Chr17:11091761-11114505 (-)
SPRET/EiJ	ENSMSPG00010042539	lncRNA gene	Chr17:12394189-12416918 (-)
WSB/EiJ	ENSIUOG00005040004	lncRNA gene	Chr17:11843128-11865763 (-)

Homology

• Gene Tree
  Gm35576
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000116851 (Evidence)
• NCBI Gene
  102639216

Representative Sequences			Length	Strain/Species
genomic	102639216	NCBI Gene Model | MGI Sequence Detail	2763	C57BL/6J
transcript	XR_385431	RefSeq | MGI Sequence Detail	380	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;