Gm35514 Gene Detail

Summary

• Symbol
  Gm35514
• Name
  predicted gene, 35514

• Feature Type
  lncRNA gene
• IDs
  MGI:5594673
  NCBI Gene: 102639128
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:69543666-69545684 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594673	lncRNA gene	Chr13:69543614-69545684 (+)
129S1/SvImJ	ENSMUSG00200014035	lncRNA gene	Chr13:63906888-63907623 (+)
A/J	ENSMUSG00195030774	lncRNA gene	Chr13:64528758-64529493 (+)
AKR/J	ENSMUSG00220038193	lncRNA gene	Chr13:63103158-63103893 (+)
BALB/cJ	ENSMUSG00180029364	lncRNA gene	Chr13:65013816-65014551 (+)
C3H/HeJ	ENSMUSG00175009015	lncRNA gene	Chr13:65314110-65314845 (+)
C57BL/6NJ	ENSMUSG00215019355	lncRNA gene	Chr13:65070228-65070963 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012160	lncRNA gene	Chr13:64646784-64647519 (+)
CBA/J	ENSMUSG00210009449	lncRNA gene	Chr13:64636983-64637718 (+)
DBA/2J	ENSMUSG00185008960	lncRNA gene	Chr13:68333273-68334008 (+)
FVB/NJ	ENSMUSG00205027740	lncRNA gene	Chr13:64012854-64013589 (+)
JF1/MsJ	ENSUMUG00000034235	lncRNA gene	Chr13:68065672-68066407 (+)
LP/J	ENSMUSG00230034104	lncRNA gene	Chr13:78250629-78251364 (+)
NOD/ShiLtJ	ENSMUSG00190042979	lncRNA gene	Chr13:64641136-64641871 (+)
NZO/HlLtJ	ENSMUSG00225048302	lncRNA gene	Chr13:70741845-70742580 (+)
PWK/PhJ	ENSLUMG00010012353	lncRNA gene	Chr13:64121386-64122121 (+)
SPRET/EiJ	ENSMSPG00010030976	lncRNA gene	Chr13:65020234-65020970 (+)
WSB/EiJ	ENSIUOG00005025230	lncRNA gene	Chr13:63503577-63504312 (+)

Homology

• Gene Tree
  Gm35514
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35514
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  32
• RefSeq
  3

• Ensembl
  ENSMUSG00000113595 (Evidence)
• NCBI Gene
  102639128

Representative Sequences			Length	Strain/Species
genomic	102639128	NCBI Gene Model | MGI Sequence Detail	2019	C57BL/6J
transcript	XR_873636	RefSeq | MGI Sequence Detail	527	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69