Gm35437 Gene Detail

Summary

• Symbol
  Gm35437
• Name
  predicted gene, 35437

• Feature Type
  lncRNA gene
• IDs
  MGI:5594596
  NCBI Gene: 102639018
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:99738860-99761398 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  796 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594596	lncRNA gene	Chr10:99738683-99788948 (+)
129S1/SvImJ	ENSMUSG00200020428	lncRNA gene	Chr10:96261323-96261769 (+)
A/J	ENSMUSG00195017043	lncRNA gene	Chr10:96692498-96692944 (+)
AKR/J	ENSMUSG00220026867	lncRNA gene	Chr10:96216807-96217253 (+)
BALB/cJ	ENSMUSG00180009944	lncRNA gene	Chr10:96700181-96700627 (+)
C3H/HeJ	ENSMUSG00175006138	lncRNA gene	Chr10:96575148-96575594 (+)
C57BL/6NJ	ENSMUSG00215007512	lncRNA gene	Chr10:96283738-96284184 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005967	lncRNA gene	Chr10:95940142-95940588 (+)
CBA/J	ENSMUSG00210023157	lncRNA gene	Chr10:96405025-96405471 (+)
DBA/2J	ENSMUSG00185019277	lncRNA gene	Chr10:96642222-96642668 (+)
FVB/NJ	ENSMUSG00205004174	lncRNA gene	Chr10:96314148-96314594 (+)
JF1/MsJ	ENSUMUG00000031152	lncRNA gene	Chr10:98051371-98051817 (+)
LP/J	ENSMUSG00230022888	lncRNA gene	Chr10:98560836-98561282 (+)
NOD/ShiLtJ	ENSMUSG00190027282	lncRNA gene	Chr10:96659461-96659907 (+)
NZO/HlLtJ	ENSMUSG00225040953	lncRNA gene	Chr10:102791813-102792259 (+)
PWK/PhJ	ENSLUMG00010006026	lncRNA gene	Chr10:96321875-96322321 (+)
SPRET/EiJ	ENSMSPG00010010728	lncRNA gene	Chr10:98048025-98048471 (+)
WSB/EiJ	ENSIUOG00005013883	lncRNA gene	Chr10:96372522-96372968 (+)

Homology

• Gene Tree
  Gm35437
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35437
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  36
• RefSeq
  1

• Ensembl
  ENSMUSG00000120427 (Evidence)
• NCBI Gene
  102639018

Representative Sequences			Length	Strain/Species
genomic	102639018	NCBI Gene Model | MGI Sequence Detail	22539	C57BL/6J
transcript	XR_380747	RefSeq | MGI Sequence Detail	928	C57BL/6J

Other
Accession IDs

MGI:7337815

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm35437:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr95552	Chr10:99748991-99749007 (+)	10,139 bp