Gm35430 Gene Detail

Summary

• Symbol
  Gm35430
• Name
  predicted gene, 35430

• Feature Type
  lncRNA gene
• IDs
  MGI:5594589
  NCBI Gene: 102639008
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:46104927-46113713 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  310 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594589	lncRNA gene	Chr10:46104383-46205892 (+)
129S1/SvImJ	ENSMUSG00200007564	lncRNA gene	Chr10:43007371-43104037 (+)
A/J	ENSMUSG00195003118	lncRNA gene	Chr10:43273048-43369704 (+)
AKR/J	ENSMUSG00220006708	lncRNA gene	Chr10:42967605-43064285 (+)
BALB/cJ	ENSMUSG00180011945	lncRNA gene	Chr10:43362146-43458808 (+)
C3H/HeJ	ENSMUSG00175010051	lncRNA gene	Chr10:43154281-43250905 (+)
C57BL/6NJ	ENSMUSG00215002288	lncRNA gene	Chr10:42899748-42996397 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008781	lncRNA gene	Chr10:43304626-43402309 (+)
CBA/J	ENSMUSG00210008356	lncRNA gene	Chr10:43054496-43151137 (+)
DBA/2J	ENSMUSG00185003247	lncRNA gene	Chr10:43196819-43293477 (+)
FVB/NJ	ENSMUSG00205005053	lncRNA gene	Chr10:43109499-43206163 (+)
JF1/MsJ	ENSUMUG00000028163	lncRNA gene	Chr10:43023036-43121436 (+)
LP/J	ENSMUSG00230006001	lncRNA gene	Chr10:45001019-45097671 (+)
NOD/ShiLtJ	ENSMUSG00190005645	lncRNA gene	Chr10:43338955-43435623 (+)
NZO/HlLtJ	ENSMUSG00225018888	lncRNA gene	Chr10:49286513-49383166 (+)
PWK/PhJ	ENSLUMG00010005106	lncRNA gene	Chr10:43101771-43199485 (+)
SPRET/EiJ	ENSMSPG00010013039	lncRNA gene	Chr10:44181679-44276937 (+)
WSB/EiJ	ENSIUOG00005015325	lncRNA gene	Chr10:42887997-42987021 (+)

Homology

• Gene Tree
  Gm35430
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm35430
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  45
• RefSeq
  2

• Ensembl
  ENSMUSG00000111182 (Evidence)
• NCBI Gene
  102639008

Representative Sequences			Length	Strain/Species
genomic	102639008	NCBI Gene Model | MGI Sequence Detail	8787	C57BL/6J
transcript	XR_380298	RefSeq | MGI Sequence Detail	475	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87