Gm35392 Gene Detail

Summary

• Symbol
  Gm35392
• Name
  predicted gene, 35392

• Feature Type
  lncRNA gene
• IDs
  MGI:5594551
  NCBI Gene: 102638957
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:15425641-15432429 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  355 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594551	lncRNA gene	Chr8:15425639-15432429 (+)
129S1/SvImJ	ENSMUSG00200033453	lncRNA gene	Chr8:12339287-12352983 (+)
A/J	ENSMUSG00195042876	lncRNA gene	Chr8:12683571-12690395 (+)
AKR/J	ENSMUSG00220035280	lncRNA gene	Chr8:12388869-12395701 (+)
BALB/cJ	ENSMUSG00180025023	lncRNA gene	Chr8:12298706-12305494 (+)
C3H/HeJ	ENSMUSG00175040330	lncRNA gene	Chr8:12482348-12489152 (+)
C57BL/6NJ	ENSMUSG00215027778	lncRNA gene	Chr8:12353347-12360140 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019458	lncRNA gene	Chr8:12303061-12309981 (+)
CBA/J	ENSMUSG00210042762	lncRNA gene	Chr8:12316193-12323011 (+)
DBA/2J	ENSMUSG00185006866	lncRNA gene	Chr8:12448903-12455715 (+)
FVB/NJ	ENSMUSG00205033152	lncRNA gene	Chr8:12339685-12346497 (+)
JF1/MsJ	ENSUMUG00000032330	lncRNA gene	Chr8:12450228-12463928 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190041645	lncRNA gene	Chr8:12446497-12453305 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010030816	lncRNA gene	Chr8:12363847-12377577 (+)
SPRET/EiJ	ENSMSPG00010015000	lncRNA gene	Chr8:12546655-12553636 (+)
WSB/EiJ	ENSIUOG00005021401	lncRNA gene	Chr8:12330011-12336893 (+)

Homology

• Gene Tree
  Gm35392
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000109748 (Evidence)
• NCBI Gene
  102638957

Representative Sequences			Length	Strain/Species
genomic	102638957	NCBI Gene Model | MGI Sequence Detail	6789	C57BL/6J
transcript	AK047874	GenBank | ENA | DDBJ | MGI Sequence Detail	2121	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;