Gm35268 Gene Detail

Summary

• Symbol
  Gm35268
• Name
  predicted gene, 35268

• Feature Type
  lncRNA gene
• IDs
  MGI:5594427
  NCBI Gene: 102638787
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr19:27290275-27299129 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  378 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594427	lncRNA gene	Chr19:27289872-27299593 (+)
129S1/SvImJ	ENSMUSG00200020680	lncRNA gene	Chr19:24006883-24016168 (+)
A/J	ENSMUSG00195036434	lncRNA gene	Chr19:24182247-24191578 (+)
AKR/J	ENSMUSG00220019766	lncRNA gene	Chr19:24222715-24232031 (+)
BALB/cJ	ENSMUSG00180013689	lncRNA gene	Chr19:24503639-24512936 (+)
C3H/HeJ	ENSMUSG00175026441	lncRNA gene	Chr19:23880014-23889314 (+)
C57BL/6NJ	ENSMUSG00215027725	lncRNA gene	Chr19:23920358-23929653 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018943	lncRNA gene	Chr19:23759145-23768534 (+)
CBA/J	ENSMUSG00210014828	lncRNA gene	Chr19:24111005-24120300 (+)
DBA/2J	ENSMUSG00185026534	lncRNA gene	Chr19:24497730-24507029 (+)
FVB/NJ	ENSMUSG00205014257	lncRNA gene	Chr19:23885621-23894947 (+)
JF1/MsJ	ENSUMUG00000037335	lncRNA gene	Chr19:24717014-24726451 (+)
LP/J	ENSMUSG00230029174	lncRNA gene	Chr19:25316300-25325585 (+)
NOD/ShiLtJ	ENSMUSG00190023427	lncRNA gene	Chr19:23874493-23883792 (+)
NZO/HlLtJ	ENSMUSG00225034371	lncRNA gene	Chr19:29067160-29076442 (+)
PWK/PhJ	ENSLUMG00010035409	lncRNA gene	Chr19:24091190-24100572 (+)
SPRET/EiJ	ENSMSPG00010037742	lncRNA gene	Chr19:24047235-24056894 (+)
WSB/EiJ	ENSIUOG00005028918	lncRNA gene	Chr19:23607266-23616563 (+)

Homology

• Gene Tree
  Gm35268
  

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000120513 (Evidence)
• NCBI Gene
  102638787

Representative Sequences			Length	Strain/Species
genomic	102638787	NCBI Gene Model | MGI Sequence Detail	8855	C57BL/6J
transcript	XR_386629	RefSeq | MGI Sequence Detail	1020	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm35268:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr155735	Chr19:27290294-27290304 (+)	24 bp
Tssr155736	Chr19:27290370-27290375 (+)	98 bp