Gm35254 Gene Detail

Summary

• Symbol
  Gm35254
• Name
  predicted gene, 35254

• Feature Type
  lncRNA gene
• IDs
  MGI:5594413
  NCBI Gene: 102638770
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:62073145-62084359 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  376 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594413	lncRNA gene	Chr8:62062444-62084401 (+)
129S1/SvImJ	ENSMUSG00200007764	lncRNA gene	Chr8:56870434-56892376 (+)
A/J	ENSMUSG00195012286	lncRNA gene	Chr8:57241489-57263432 (+)
AKR/J	ENSMUSG00220006474	lncRNA gene	Chr8:57057587-57079540 (+)
BALB/cJ	ENSMUSG00180014377	lncRNA gene	Chr8:56855873-56877830 (+)
C3H/HeJ	ENSMUSG00175008135	lncRNA gene	Chr8:57060366-57082305 (+)
C57BL/6NJ	ENSMUSG00215011456	lncRNA gene	Chr8:56882350-56904316 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006762	lncRNA gene	Chr8:56737233-56759453 (+)
CBA/J	ENSMUSG00210009534	lncRNA gene	Chr8:56962149-56984093 (+)
DBA/2J	ENSMUSG00185022717	lncRNA gene	Chr8:63015412-63037362 (+)
FVB/NJ	ENSMUSG00205013411	lncRNA gene	Chr8:56282673-56304634 (+)
JF1/MsJ	ENSUMUG00000014801	lncRNA gene	Chr8:65313170-65335209 (+)
LP/J	ENSMUSG00230007314	lncRNA gene	Chr8:66673733-66695687 (+)
NOD/ShiLtJ	ENSMUSG00190010088	lncRNA gene	Chr8:56844823-56866767 (+)
NZO/HlLtJ	ENSMUSG00225031404	lncRNA gene	Chr8:70109930-70131864 (+)
PWK/PhJ	ENSLUMG00010013156	lncRNA gene	Chr8:56738399-56760249 (+)
SPRET/EiJ	ENSMSPG00010014841	lncRNA gene	Chr8:57939922-57961884 (+)
WSB/EiJ	ENSIUOG00005017531	lncRNA gene	Chr8:57761211-57783152 (+)

Homology

• Gene Tree
  Gm35254
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35254
• Find Mice (IMSR)
  0 strains or lines available

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  2

• Ensembl
  ENSMUSG00000121162 (Evidence)
• NCBI Gene
  102638770

Representative Sequences			Length	Strain/Species
genomic	102638770	NCBI Gene Model | MGI Sequence Detail	11215	C57BL/6J
transcript	AK035585	GenBank | ENA | DDBJ | MGI Sequence Detail	1520	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;