Gm35216 Gene Detail

Summary

• Symbol
  Gm35216
• Name
  predicted gene, 35216

• Feature Type
  lncRNA gene
• IDs
  MGI:5594375
  NCBI Gene: 102638722
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr6:44057422-44060289 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594375	lncRNA gene	Chr6:44025640-44060337 (-)
129S1/SvImJ	ENSMUSG00200005457	lncRNA gene	Chr6:41126222-41129078 (-)
A/J	ENSMUSG00195007182	lncRNA gene	Chr6:41017984-41020851 (-)
AKR/J	ENSMUSG00220009812	lncRNA gene	Chr6:40687169-40690038 (-)
BALB/cJ	ENSMUSG00180026828	lncRNA gene	Chr6:41212633-41215503 (-)
C3H/HeJ	ENSMUSG00175018628	lncRNA gene	Chr6:41052397-41055253 (-)
C57BL/6NJ	ENSMUSG00215012039	lncRNA gene	Chr6:41174021-41176889 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006326	lincRNA gene	Chr6:38702474-38704579 (-)
CAST/EiJ	ENSTCUG00005038813	lncRNA gene	Chr6:40536045-40538907 (-)
CBA/J	ENSMUSG00210018803	lncRNA gene	Chr6:41102089-41104945 (-)
DBA/2J	ENSMUSG00185014660	lncRNA gene	Chr6:41204723-41207578 (-)
FVB/NJ	ENSMUSG00205033826	lncRNA gene	Chr6:41106287-41109156 (-)
JF1/MsJ	ENSUMUG00000016578	lncRNA gene	Chr6:40748514-40751372 (-)
LP/J	ENSMUSG00230021463	lncRNA gene	Chr6:42129397-42132253 (-)
NOD/ShiLtJ	ENSMUSG00190041501	lncRNA gene	Chr6:40999645-41002511 (-)
NZO/HlLtJ	ENSMUSG00225019297	lncRNA gene	Chr6:44108914-44111770 (-)
PWK/PhJ	ENSLUMG00010048922	lncRNA gene	Chr6:40582689-40585544 (-)
SPRET/EiJ	ENSMSPG00010011137	lncRNA gene	Chr6:41155056-41164579 (-)
WSB/EiJ	ENSIUOG00005029999	lncRNA gene	Chr6:41321435-41324315 (-)

Homology

• Gene Tree
  Gm35216
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  65
• RefSeq
  5

• Ensembl
  ENSMUSG00000107598 (Evidence)
• NCBI Gene
  102638722

Representative Sequences			Length	Strain/Species
genomic	102638722	NCBI Gene Model | MGI Sequence Detail	2868	C57BL/6J
transcript	NR_167998	RefSeq | MGI Sequence Detail	591	ZRU/MplStud

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm35216:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr60685	Chr6:44060282-44060300 (-)	-2 bp
Tssr60684	Chr6:44060262-44060279 (-)	18 bp
Tssr60683	Chr6:44060241-44060250 (-)	43 bp