Gm35206 Gene Detail

Summary

• Symbol
  Gm35206
• Name
  predicted gene, 35206

• Feature Type
  lncRNA gene
• IDs
  MGI:5594365
  NCBI Gene: 102638712
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:99595361-99666424 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2350 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594365	lncRNA gene	Chr10:99595361-99666444 (+)
129S1/SvImJ	ENSMUSG00200020435	lncRNA gene	Chr10:96107727-96178746 (+)
A/J	ENSMUSG00195017073	lncRNA gene	Chr10:96538863-96609928 (+)
AKR/J	ENSMUSG00220026895	lncRNA gene	Chr10:96063736-96140737 (+)
BALB/cJ	ENSMUSG00180009964	lncRNA gene	Chr10:96546595-96617609 (+)
C3H/HeJ	ENSMUSG00175006142	lncRNA gene	Chr10:96428565-96499091 (+)
C57BL/6NJ	ENSMUSG00215007524	lncRNA gene	Chr10:96130080-96201155 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005975	lncRNA gene	Chr10:95790881-95863916 (+)
CBA/J	ENSMUSG00210023161	lncRNA gene	Chr10:96258434-96328967 (+)
DBA/2J	ENSMUSG00185019301	lncRNA gene	Chr10:96488655-96559667 (+)
FVB/NJ	ENSMUSG00205004185	lncRNA gene	Chr10:96167754-96238085 (+)
JF1/MsJ	ENSUMUG00000031219	lncRNA gene	Chr10:97897694-97968786 (+)
LP/J	ENSMUSG00230022802	lncRNA gene	Chr10:98407227-98478273 (+)
NOD/ShiLtJ	ENSMUSG00190027338	lncRNA gene	Chr10:96506418-96583409 (+)
NZO/HlLtJ	ENSMUSG00225040863	lncRNA gene	Chr10:102638226-102709257 (+)
PWK/PhJ	ENSLUMG00010006032	lncRNA gene	Chr10:96157542-96239520 (+)
SPRET/EiJ	ENSMSPG00010010735	lncRNA gene	Chr10:97885337-97971742 (+)
WSB/EiJ	ENSIUOG00005013888	lncRNA gene	Chr10:96205603-96288158 (+)

Homology

• Gene Tree
  Gm35206
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35206
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000112304 (Evidence)
• NCBI Gene
  102638712

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112304	Ensembl Gene Model | MGI Sequence Detail	71064	C57BL/6J
transcript	ENSMUST00000217945	Ensembl | MGI Sequence Detail	1642	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87