Gm35189 Gene Detail

Summary

• Symbol
  Gm35189
• Name
  predicted gene, 35189

• Feature Type
  lncRNA gene
• IDs
  MGI:5594348
  NCBI Gene: 102638686
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:77086371-77088975 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  204 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594348	lncRNA gene	Chr12:77085368-77099835 (-)
129S1/SvImJ	ENSMUSG00200032649	lncRNA gene	Chr12:69026906-69029507 (-)
A/J	ENSMUSG00195033840	lncRNA gene	Chr12:71748475-71751079 (-)
AKR/J	ENSMUSG00220015588	lncRNA gene	Chr12:69502930-69505534 (-)
BALB/cJ	ENSMUSG00180034150	lncRNA gene	Chr12:70705280-70707884 (-)
C3H/HeJ	ENSMUSG00175042515	lncRNA gene	Chr12:73876141-73878745 (-)
C57BL/6NJ	ENSMUSG00215032050	lncRNA gene	Chr12:70083366-70085970 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035924	lncRNA gene	Chr12:70043724-70046337 (-)
CBA/J	ENSMUSG00210031360	lncRNA gene	Chr12:70295483-70298087 (-)
DBA/2J	ENSMUSG00185044389	lncRNA gene	Chr12:72155903-72158507 (-)
FVB/NJ	ENSMUSG00205036763	lncRNA gene	Chr12:69906398-69908993 (-)
JF1/MsJ	ENSUMUG00000021863	lncRNA gene	Chr12:76177768-76180358 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190012736	lncRNA gene	Chr12:69342752-69345356 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010031847	lncRNA gene	Chr12:70203424-70206014 (-)
SPRET/EiJ	ENSMSPG00010020903	lncRNA gene	Chr12:71970640-71973248 (-)
WSB/EiJ	ENSIUOG00005013065	lncRNA gene	Chr12:69976765-69979369 (-)

Homology

• Gene Tree
  Gm35189
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35189
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  3

• Ensembl
  ENSMUSG00000112030 (Evidence)
• NCBI Gene
  102638686

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112030	Ensembl Gene Model | MGI Sequence Detail	2605	C57BL/6J
transcript	ENSMUST00000219319	Ensembl | MGI Sequence Detail	789	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;