Gm35166 Gene Detail

Summary

• Symbol
  Gm35166
• Name
  predicted gene, 35166

• Feature Type
  lncRNA gene
• IDs
  MGI:5594325
  NCBI Gene: 102638653
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:47740401-47745666 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  253 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594325	lncRNA gene	Chr14:47740401-47745687 (-)
129S1/SvImJ	ENSMUSG00200016916	lncRNA gene	Chr14:36561504-36566772 (-)
A/J	ENSMUSG00195024676	lncRNA gene	Chr14:36767162-36772430 (-)
AKR/J	ENSMUSG00220041965	lncRNA gene	Chr14:36142107-36147375 (-)
BALB/cJ	ENSMUSG00180044956	lncRNA gene	Chr14:36376002-36381270 (-)
C3H/HeJ	ENSMUSG00175027823	lncRNA gene	Chr14:38056445-38061713 (-)
C57BL/6NJ	ENSMUSG00215038354	lncRNA gene	Chr14:36761015-36766257 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010684	lncRNA gene	Chr14:38551223-38556501 (-)
CBA/J	ENSMUSG00210041554	lncRNA gene	Chr14:36701678-36706946 (-)
DBA/2J	ENSMUSG00185056048	lncRNA gene	Chr14:41492153-41497421 (-)
FVB/NJ	ENSMUSG00205046631	lncRNA gene	Chr14:35919214-35924482 (-)
JF1/MsJ	ENSUMUG00000052503	lncRNA gene	Chr14:53536801-53542044 (-)
LP/J	ENSMUSG00230053470	lncRNA gene	Chr14:53745716-53750959 (-)
NOD/ShiLtJ	ENSMUSG00190047293	lncRNA gene	Chr14:36393202-36398470 (-)
NZO/HlLtJ	ENSMUSG00225051036	lncRNA gene	Chr14:43999034-44004302 (-)
PWK/PhJ	ENSLUMG00010044176	lncRNA gene	Chr14:35993106-35998350 (-)
SPRET/EiJ	ENSMSPG00010003226	lncRNA gene	Chr14:39322789-39328067 (-)
WSB/EiJ	ENSIUOG00005038878	lncRNA gene	Chr14:36273994-36279259 (-)

Homology

• Gene Tree
  Gm35166
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35166
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000115145 (Evidence)
• NCBI Gene
  102638653

Representative Sequences			Length	Strain/Species
genomic	102638653	NCBI Gene Model | MGI Sequence Detail	5266	C57BL/6J
transcript	XR_383410	RefSeq | MGI Sequence Detail	460	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;