Gm35161 Gene Detail

Summary

• Symbol
  Gm35161
• Name
  predicted gene, 35161

• Feature Type
  lncRNA gene
• IDs
  MGI:5594320
  NCBI Gene: 102638647
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:69147717-69179674 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  961 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594320	lncRNA gene	Chr13:69145759-69179674 (+)
129S1/SvImJ	ENSMUSG00200013703	lncRNA gene	Chr13:63494313-63527207 (+)
A/J	ENSMUSG00195029311	lncRNA gene	Chr13:64136354-64169241 (+)
AKR/J	ENSMUSG00220037318	lncRNA gene	Chr13:62708534-62741445 (+)
BALB/cJ	ENSMUSG00180027951	lncRNA gene	Chr13:64616609-64649491 (+)
C3H/HeJ	ENSMUSG00175008559	lncRNA gene	Chr13:64926206-64959107 (+)
C57BL/6NJ	ENSMUSG00215017455	lncRNA gene	Chr13:64672253-64705014 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012117	lncRNA gene	Chr13:64280285-64313194 (+)
CBA/J	ENSMUSG00210009486	lncRNA gene	Chr13:64249097-64281993 (+)
DBA/2J	ENSMUSG00185009267	lncRNA gene	Chr13:67945398-67978297 (+)
FVB/NJ	ENSMUSG00205030564	lncRNA gene	Chr13:63618845-63651742 (+)
JF1/MsJ	ENSUMUG00000037408	lncRNA gene	Chr13:67667555-67700344 (+)
LP/J	ENSMUSG00230034119	lncRNA gene	Chr13:77859227-77892139 (+)
NOD/ShiLtJ	ENSMUSG00190044217	lncRNA gene	Chr13:64248754-64281638 (+)
NZO/HlLtJ	ENSMUSG00225048091	lncRNA gene	Chr13:70353954-70386847 (+)
PWK/PhJ	ENSLUMG00010012796	lncRNA gene	Chr13:63723503-63756292 (+)
SPRET/EiJ	ENSMSPG00010031973	lncRNA gene	Chr13:64641258-64674433 (+)
WSB/EiJ	ENSIUOG00005022489	lncRNA gene	Chr13:63098698-63131648 (+)

Homology

• Gene Tree
  Gm35161
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35161
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  54
• RefSeq
  15

• Ensembl
  ENSMUSG00000113121 (Evidence)
• NCBI Gene
  102638647

Representative Sequences			Length	Strain/Species
genomic	102638647	NCBI Gene Model | MGI Sequence Detail	31958	C57BL/6J
transcript	XR_004938194	RefSeq | MGI Sequence Detail	4320	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69