Gm35160 Pseudogene Detail

Summary

• Symbol
  Gm35160
• Name
  predicted gene, 35160

• Feature Type
  pseudogene
• IDs
  MGI:5594319
  NCBI Gene: 102638646
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:41000371-41001025 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  162 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594319	pseudogene	Chr13:41000215-41001030 (+)
129S1/SvImJ	ENSMUSG00200013118	pseudogene	Chr13:38268949-38269764 (+)
A/J	ENSMUSG00195035072	pseudogene	Chr13:37329850-37330665 (+)
AKR/J	ENSMUSG00220031452	pseudogene	Chr13:37115983-37116798 (+)
BALB/cJ	ENSMUSG00180008282	pseudogene	Chr13:37635284-37636099 (+)
C3H/HeJ	ENSMUSG00175014519	pseudogene	Chr13:37600188-37601003 (+)
C57BL/6NJ	ENSMUSG00215017851	pseudogene	Chr13:37740788-37741603 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036552	pseudogene	Chr13:37647982-37648825 (+)
CBA/J	ENSMUSG00210012081	pseudogene	Chr13:37605873-37606688 (+)
DBA/2J	ENSMUSG00185035044	pseudogene	Chr13:38400175-38400990 (+)
FVB/NJ	ENSMUSG00205035462	pseudogene	Chr13:37354442-37355257 (+)
JF1/MsJ	ENSUMUG00000035251	pseudogene	Chr13:37947060-37947879 (+)
LP/J	ENSMUSG00230017456	pseudogene	Chr13:47738116-47738931 (+)
NOD/ShiLtJ	ENSMUSG00190013050	pseudogene	Chr13:37803489-37804304 (+)
NZO/HlLtJ	ENSMUSG00225036777	pseudogene	Chr13:41513842-41514657 (+)
PWK/PhJ	ENSLUMG00010032870	pseudogene	Chr13:36797620-36798450 (+)
SPRET/EiJ	ENSMSPG00010011401	pseudogene	Chr13:36828819-36829608 (+)
WSB/EiJ	ENSIUOG00005029976	pseudogene	Chr13:36947984-36948799 (+)

Homology

• Gene Tree
  Gm35160
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm35160
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000114560 (Evidence)
• NCBI Gene
  102638646

Representative Sequences			Length	Strain/Species
genomic	102638646	NCBI Gene Model | MGI Sequence Detail	655	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69