Gm35137 Gene Detail

Summary

• Symbol
  Gm35137
• Name
  predicted gene, 35137

• Feature Type
  lncRNA gene
• IDs
  MGI:5594296
  NCBI Gene: 102638614
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr4:98585130-98587380 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594296	lncRNA gene	Chr4:98585126-98587392 (-)
129S1/SvImJ	ENSMUSG00200030504	lncRNA gene	Chr4:93562086-93564345 (-)
A/J	ENSMUSG00195008600	lncRNA gene	Chr4:94091784-94094044 (-)
AKR/J	ENSMUSG00220006808	lncRNA gene	Chr4:93570615-93572877 (-)
BALB/cJ	ENSMUSG00180034016	lncRNA gene	Chr4:93037180-93039441 (-)
C3H/HeJ	ENSMUSG00175015074	lncRNA gene	Chr4:93999450-94001709 (-)
C57BL/6NJ	ENSMUSG00215024220	lncRNA gene	Chr4:93958636-93960898 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007413	lncRNA gene	Chr4:93270783-93273043 (-)
CBA/J	ENSMUSG00210029718	lncRNA gene	Chr4:93564961-93567220 (-)
DBA/2J	ENSMUSG00185023012	lncRNA gene	Chr4:94353485-94355744 (-)
FVB/NJ	ENSMUSG00205016790	lncRNA gene	Chr4:92566461-92568723 (-)
JF1/MsJ	ENSUMUG00000041410	lncRNA gene	Chr4:94461412-94463633 (-)
LP/J	ENSMUSG00230023228	lncRNA gene	Chr4:97671664-97673923 (-)
NOD/ShiLtJ	ENSMUSG00190031808	lncRNA gene	Chr4:93034972-93037231 (-)
NZO/HlLtJ	ENSMUSG00225003872	lncRNA gene	Chr4:102807522-102809784 (-)
PWK/PhJ	ENSLUMG00010018441	lncRNA gene	Chr4:92174766-92176993 (-)
SPRET/EiJ	ENSMSPG00010008266	lncRNA gene	Chr4:94408209-94410413 (-)
WSB/EiJ	ENSIUOG00005003210	lncRNA gene	Chr4:93354599-93356862 (-)

Homology

• Gene Tree
  Gm35137
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Targeted
  1
• Genomic Mutations
  4 involving Gm35137
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000120805 (Evidence)
• NCBI Gene
  102638614

Representative Sequences			Length	Strain/Species
genomic	102638614	NCBI Gene Model | MGI Sequence Detail	2251	C57BL/6J
transcript	NR_168468	RefSeq | MGI Sequence Detail	922	ZRU/MplStud

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12

TSS for Gm35137:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr42512	Chr4:98587374-98587385 (-)	0 bp
Tssr42511	Chr4:98587353-98587366 (-)	20 bp
Tssr42510	Chr4:98587338-98587348 (-)	37 bp