Gm35082 Gene Detail

Summary

• Symbol
  Gm35082
• Name
  predicted gene, 35082
• Synonyms
  Gm44791

• Feature Type
  lncRNA gene
• IDs
  MGI:5594241
  NCBI Gene: 102638545
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:100324294-100326967 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594241	lncRNA gene	Chr7:100322731-100327349 (+)
129S1/SvImJ	ENSMUSG00200050891	lncRNA gene	Chr7:87153583-87156271 (+)
A/J	ENSMUSG00195054771	lncRNA gene	Chr7:91659061-91661749 (+)
AKR/J	ENSMUSG00220052071	lncRNA gene	Chr7:85075699-85078387 (+)
BALB/cJ	ENSMUSG00180037046	lncRNA gene	Chr7:88332031-88334718 (+)
C3H/HeJ	ENSMUSG00175024171	lncRNA gene	Chr7:88990496-88993187 (+)
C57BL/6NJ	ENSMUSG00215035995	lncRNA gene	Chr7:88170510-88173183 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053202	lncRNA gene	Chr7:91578708-91581389 (+)
CBA/J	ENSMUSG00210025777	lncRNA gene	Chr7:88844097-88846788 (+)
DBA/2J	ENSMUSG00185057037	lncRNA gene	Chr7:93165628-93168318 (+)
FVB/NJ	ENSMUSG00205037996	lncRNA gene	Chr7:88830192-88832879 (+)
JF1/MsJ	ENSUMUG00000052526	lncRNA gene	Chr7:98070902-98073592 (+)
LP/J	ENSMUSG00230045199	lncRNA gene	Chr7:99295356-99298043 (+)
NOD/ShiLtJ	ENSMUSG00190021847	lncRNA gene	Chr7:89112619-89115294 (+)
NZO/HlLtJ	ENSMUSG00225051468	lncRNA gene	Chr7:97473058-97475734 (+)
PWK/PhJ	ENSLUMG00010050484	lncRNA gene	Chr7:87323610-87324070 (+)
SPRET/EiJ	ENSMSPG00010012595	lncRNA gene	Chr7:88557823-88560510 (+)
WSB/EiJ	ENSIUOG00005011118	lncRNA gene	Chr7:89459923-89462599 (+)

Homology

• Gene Tree
  Gm35082
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Gene trapped
  1
• Genomic Mutations
  1 involving Gm35082
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000108866 (Evidence)
• NCBI Gene
  102638545

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108866	Ensembl Gene Model | MGI Sequence Detail	2674	C57BL/6J
transcript	ENSMUST00000380735	Ensembl | MGI Sequence Detail	739	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

Other
Accession IDs

MGI:5753367

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55