Gm35077 Gene Detail

Summary

• Symbol
  Gm35077
• Name
  predicted gene, 35077
• Synonyms
  Gm44042

• Feature Type
  lncRNA gene
• IDs
  MGI:5594236
  NCBI Gene: 102638540
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:58474941-58510675 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  1195 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594236	lncRNA gene	Chr6:58434850-58561768 (-)
129S1/SvImJ	ENSMUSG00200006280	lncRNA gene	Chr6:55469008-55532956 (-)
A/J	ENSMUSG00195034863	lncRNA gene	Chr6:55152099-55216037 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180010546	lncRNA gene	Chr6:55449209-55513139 (-)
C3H/HeJ	ENSMUSG00175039820	lncRNA gene	Chr6:55210530-55274465 (-)
C57BL/6NJ	ENSMUSG00215028863	lncRNA gene	Chr6:55427440-55491386 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040005	lncRNA gene	Chr6:54679627-54737958 (-)
CBA/J	ENSMUSG00210034121	lncRNA gene	Chr6:55247787-55311727 (-)
DBA/2J	ENSMUSG00185020504	lncRNA gene	Chr6:55830097-55894038 (-)
FVB/NJ	ENSMUSG00205032354	lncRNA gene	Chr6:55102744-55102790 (-)
JF1/MsJ	ENSUMUG00000036909	lncRNA gene	Chr6:55262313-55320117 (-)
LP/J	ENSMUSG00230014535	lncRNA gene	Chr6:56947768-57011714 (-)
NOD/ShiLtJ	ENSMUSG00190008777	lncRNA gene	Chr6:55167074-55231006 (-)
NZO/HlLtJ	ENSMUSG00225013998	lncRNA gene	Chr6:58939693-59003635 (-)
PWK/PhJ	ENSLUMG00010018504	lncRNA gene	Chr6:54825621-54883605 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005020809	lncRNA gene	Chr6:55444926-55507944 (-)

Homology

• Gene Tree
  Gm35077
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000107960 (Evidence)
• NCBI Gene
  102638540

Representative Sequences			Length	Strain/Species
genomic	102638540	NCBI Gene Model | MGI Sequence Detail	35735	C57BL/6J
transcript	XR_869135	RefSeq | MGI Sequence Detail	279	C57BL/6J

Other
Accession IDs

MGI:5690434

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm35077:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr61169	Chr6:58510598-58510625 (-)	63 bp