Gm34973 Gene Detail

Summary

• Symbol
  Gm34973
• Name
  predicted gene, 34973

• Feature Type
  lncRNA gene
• IDs
  MGI:5594132
  NCBI Gene: 102638396
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:15292663-15298721 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  216 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594132	lncRNA gene	Chr9:15280717-15300850 (+)
129S1/SvImJ	ENSMUSG00200050055	lncRNA gene	Chr9:12194525-12200583 (+)
A/J	ENSMUSG00195039495	lncRNA gene	Chr9:12079814-12085870 (+)
AKR/J	ENSMUSG00220035551	lncRNA gene	Chr9:12057575-12063631 (+)
BALB/cJ	ENSMUSG00180042807	lncRNA gene	Chr9:12204149-12210203 (+)
C3H/HeJ	ENSMUSG00175045540	lncRNA gene	Chr9:12151018-12157074 (+)
C57BL/6NJ	ENSMUSG00215038970	lncRNA gene	Chr9:12145628-12151686 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035746	lncRNA gene	Chr9:12186793-12192894 (+)
CBA/J	ENSMUSG00210045089	lncRNA gene	Chr9:12182201-12188257 (+)
DBA/2J	ENSMUSG00185026644	lncRNA gene	Chr9:12270719-12276775 (+)
FVB/NJ	ENSMUSG00205043123	lncRNA gene	Chr9:12254754-12260813 (+)
JF1/MsJ	ENSUMUG00000049791	lncRNA gene	Chr9:12273620-12279671 (+)
LP/J	ENSMUSG00230044091	lncRNA gene	Chr9:12692583-12698639 (+)
NOD/ShiLtJ	ENSMUSG00190040375	lncRNA gene	Chr9:12181186-12187242 (+)
NZO/HlLtJ	ENSMUSG00225051037	lncRNA gene	Chr9:12590157-12596219 (+)
PWK/PhJ	ENSLUMG00010047131	lncRNA gene	Chr9:12206688-12212755 (+)
SPRET/EiJ	ENSMSPG00010025841	lncRNA gene	Chr9:12394224-12400775 (+)
WSB/EiJ	ENSIUOG00005045352	lncRNA gene	Chr9:11857764-11863820 (+)

Homology

• Gene Tree
  Gm34973
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000111763 (Evidence)
• NCBI Gene
  102638396

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111763	Ensembl Gene Model | MGI Sequence Detail	6059	C57BL/6J
transcript	ENSMUST00000217087	Ensembl | MGI Sequence Detail	572	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;