Gm34911 Gene Detail

Summary

• Symbol
  Gm34911
• Name
  predicted gene, 34911

• Feature Type
  lncRNA gene
• IDs
  MGI:5594070
  NCBI Gene: 102638319
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:35877439-35882668 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  237 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5594070	lncRNA gene	Chr8:35871887-35882683 (-)
129S1/SvImJ	ENSMUSG00200007681	lncRNA gene	Chr8:30968493-30973599 (-)
A/J	ENSMUSG00195005933	lncRNA gene	Chr8:31470550-31475656 (-)
AKR/J	ENSMUSG00220006098	lncRNA gene	Chr8:31233258-31238366 (-)
BALB/cJ	ENSMUSG00180003204	lncRNA gene	Chr8:31013912-31019019 (-)
C3H/HeJ	ENSMUSG00175014748	lncRNA gene	Chr8:31176485-31181591 (-)
C57BL/6NJ	ENSMUSG00215008967	lncRNA gene	Chr8:30946523-30951619 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005701	lncRNA gene	Chr8:31133522-31138668 (-)
CBA/J	ENSMUSG00210012757	lncRNA gene	Chr8:30999458-31004564 (-)
DBA/2J	ENSMUSG00185002366	lncRNA gene	Chr8:36925733-36930839 (-)
FVB/NJ	ENSMUSG00205002337	lncRNA gene	Chr8:30212053-30217159 (-)
JF1/MsJ	ENSUMUG00000010439	lncRNA gene	Chr8:38622484-38627580 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190015691	lncRNA gene	Chr8:31047345-31052451 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010013060	lncRNA gene	Chr8:30845947-30851075 (-)
SPRET/EiJ	ENSMSPG00010004557	lncRNA gene	Chr8:31570467-31575540 (-)
WSB/EiJ	ENSIUOG00005005786	lncRNA gene	Chr8:31802613-31807727 (-)

Homology

• Gene Tree
  Gm34911
  

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  1

• Ensembl
  ENSMUSG00000120501 (Evidence)
• NCBI Gene
  102638319

Representative Sequences			Length	Strain/Species
genomic	102638319	NCBI Gene Model | MGI Sequence Detail	5230	C57BL/6J
transcript	XR_378889	RefSeq | MGI Sequence Detail	946	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm34911:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr80935	Chr8:35882544-35882578 (-)	107 bp