Gm34821 Gene Detail

Summary

• Symbol
  Gm34821
• Name
  predicted gene, 34821

• Feature Type
  lncRNA gene
• IDs
  MGI:5593980
  NCBI Gene: 102638204
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:99820623-99825877 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  261 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593980	lncRNA gene	Chr7:99820621-99876467 (-)
129S1/SvImJ	ENSMUSG00200050065	lncRNA gene	Chr7:86649374-86705238 (-)
A/J	ENSMUSG00195041009	lncRNA gene	Chr7:91154790-91210658 (-)
AKR/J	ENSMUSG00220052151	lncRNA gene	Chr7:84571435-84627310 (-)
BALB/cJ	ENSMUSG00180035228	lncRNA gene	Chr7:87827806-87883670 (-)
C3H/HeJ	ENSMUSG00175024841	lncRNA gene	Chr7:88477609-88533716 (-)
C57BL/6NJ	ENSMUSG00215035872	lncRNA gene	Chr7:87666781-87722580 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053154	lncRNA gene	Chr7:91071579-91127479 (-)
CBA/J	ENSMUSG00210026082	lncRNA gene	Chr7:88331314-88387425 (-)
DBA/2J	ENSMUSG00185056977	lncRNA gene	Chr7:92652723-92708828 (-)
FVB/NJ	ENSMUSG00205037928	lncRNA gene	Chr7:88325933-88381794 (-)
JF1/MsJ	ENSUMUG00000052802	lncRNA gene	Chr7:97557707-97613841 (-)
LP/J	ENSMUSG00230045123	lncRNA gene	Chr7:98791141-98847002 (-)
NOD/ShiLtJ	ENSMUSG00190021982	lncRNA gene	Chr7:88599660-88655552 (-)
NZO/HlLtJ	ENSMUSG00225051329	lncRNA gene	Chr7:96969027-97024947 (-)
PWK/PhJ	ENSLUMG00010051115	lncRNA gene	Chr7:86795733-86852289 (-)
SPRET/EiJ	ENSMSPG00010013110	lncRNA gene	Chr7:88038191-88095251 (-)
WSB/EiJ	ENSIUOG00005010828	lncRNA gene	Chr7:88955490-89011648 (-)

Homology

• Gene Tree
  Gm34821
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm34821
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  2

• Ensembl
  ENSMUSG00000109186 (Evidence)
• NCBI Gene
  102638204

Representative Sequences			Length	Strain/Species
genomic	102638204	NCBI Gene Model | MGI Sequence Detail	5255	C57BL/6J
transcript	NR_169133	RefSeq | MGI Sequence Detail	1111	ZRU/MplStud

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55

TSS for Gm34821:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr73735	Chr7:99825805-99825822 (-)	63 bp