Gm34808 Gene Detail

Summary

• Symbol
  Gm34808
• Name
  predicted gene, 34808

• Feature Type
  lncRNA gene
• IDs
  MGI:5593967
  NCBI Gene: 102638185
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:26460954-26461900 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593967	lncRNA gene	Chr19:26459715-26487721 (-)
129S1/SvImJ	ENSMUSG00200020785	lncRNA gene	Chr19:23177683-23178576 (-)
A/J	ENSMUSG00195037163	lncRNA gene	Chr19:23339875-23340768 (-)
AKR/J	ENSMUSG00220020045	lncRNA gene	Chr19:23380399-23381292 (-)
BALB/cJ	ENSMUSG00180014006	lncRNA gene	Chr19:23672557-23673450 (-)
C3H/HeJ	ENSMUSG00175025439	lncRNA gene	Chr19:23049152-23050045 (-)
C57BL/6NJ	ENSMUSG00215031228	lncRNA gene	Chr19:23089480-23090373 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018725	lncRNA gene	Chr19:22909692-22910590 (-)
CBA/J	ENSMUSG00210015134	lncRNA gene	Chr19:23280116-23281009 (-)
DBA/2J	ENSMUSG00185026567	lncRNA gene	Chr19:23666803-23667696 (-)
FVB/NJ	ENSMUSG00205013305	lncRNA gene	Chr19:23039073-23039966 (-)
JF1/MsJ	ENSUMUG00000038916	lncRNA gene	Chr19:23878022-23878914 (-)
LP/J	ENSMUSG00230029141	lncRNA gene	Chr19:24487146-24488039 (-)
NOD/ShiLtJ	ENSMUSG00190023146	lncRNA gene	Chr19:23043493-23044386 (-)
NZO/HlLtJ	ENSMUSG00225034319	lncRNA gene	Chr19:28237995-28238888 (-)
PWK/PhJ	ENSLUMG00010036226	lncRNA gene	Chr19:23229418-23230311 (-)
SPRET/EiJ	ENSMSPG00010037234	lncRNA gene	Chr19:23213393-23214279 (-)
WSB/EiJ	ENSIUOG00005028636	lncRNA gene	Chr19:22766989-22767882 (-)

Homology

• Gene Tree
  Gm34808
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  2

• Ensembl
  ENSMUSG00000118001 (Evidence)
• NCBI Gene
  102638185

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118001	Ensembl Gene Model | MGI Sequence Detail	947	C57BL/6J
transcript	ENSMUST00000237584	Ensembl | MGI Sequence Detail	556	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;