Gm34799 Gene Detail

Summary

• Symbol
  Gm34799
• Name
  predicted gene, 34799

• Feature Type
  lncRNA gene
• IDs
  MGI:5593958
  NCBI Gene: 118567366
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:10146704-10148802 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593958	lncRNA gene	Chr17:10057679-10148811 (-)
129S1/SvImJ	ENSMUSG00200035232	lncRNA gene	Chr17:6382124-6385298 (-)
A/J	ENSMUSG00195023865	lncRNA gene	Chr17:6585461-6588634 (-)
AKR/J	ENSMUSG00220027698	lncRNA gene	Chr17:6639861-6643035 (-)
BALB/cJ	ENSMUSG00180026811	lncRNA gene	Chr17:6222855-6226029 (-)
C3H/HeJ	ENSMUSG00175034751	lncRNA gene	Chr17:6375774-6378947 (-)
C57BL/6NJ	ENSMUSG00215027312	lncRNA gene	Chr17:6412983-6416157 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005022553	lncRNA gene	Chr17:6602376-6605711 (-)
CBA/J	ENSMUSG00210038469	lncRNA gene	Chr17:6042497-6045670 (-)
DBA/2J	ENSMUSG00185023656	lncRNA gene	Chr17:7135287-7138460 (-)
FVB/NJ	ENSMUSG00205009510	lncRNA gene	Chr17:6451306-6454480 (-)
JF1/MsJ	ENSUMUG00000036630	lncRNA gene	Chr17:6704303-6707630 (-)
LP/J	ENSMUSG00230034437	lncRNA gene	Chr17:8558198-8561372 (-)
NOD/ShiLtJ	ENSMUSG00190035915	lncRNA gene	Chr17:6552429-6555756 (-)
NZO/HlLtJ	ENSMUSG00225049280	lncRNA gene	Chr17:10477111-10480285 (-)
PWK/PhJ	ENSLUMG00010019510	lncRNA gene	Chr17:6539000-6542337 (-)
SPRET/EiJ	ENSMSPG00010039231	lncRNA gene	Chr17:7140672-7143801 (+)
WSB/EiJ	ENSIUOG00005014840	lncRNA gene	Chr17:6446006-6449180 (-)

Homology

• Gene Tree
  Gm34799
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  41
• RefSeq
  1

• Ensembl
  ENSMUSG00000117227 (Evidence)
• NCBI Gene
  118567366

Representative Sequences			Length	Strain/Species
genomic	118567366	NCBI Gene Model | MGI Sequence Detail	2099	C57BL/6J
transcript	XR_004939650	RefSeq | MGI Sequence Detail	631	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;