Gm34658 Pseudogene Detail

Summary

• Symbol
  Gm34658
• Name
  predicted gene, 34658

• Feature Type
  pseudogene
• IDs
  MGI:5593817
  NCBI Gene: 102637979
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:28667062-28667423 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593817	pseudogene	Chr18:28655721-28672958 (-)
129S1/SvImJ	ENSMUSG00200016455	pseudogene	Chr18:25680068-25680429 (-)
A/J	ENSMUSG00195002462	pseudogene	Chr18:25832832-25833193 (-)
AKR/J	ENSMUSG00220011760	pseudogene	Chr18:25799896-25800256 (-)
BALB/cJ	ENSMUSG00180003516	pseudogene	Chr18:26262907-26263267 (-)
C3H/HeJ	ENSMUSG00175024267	pseudogene	Chr18:25787851-25788211 (-)
C57BL/6NJ	ENSMUSG00215022814	pseudogene	Chr18:25525278-25525639 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016534	pseudogene	Chr18:25451931-25452292 (-)
CBA/J	ENSMUSG00210016091	pseudogene	Chr18:25823298-25823659 (-)
DBA/2J	ENSMUSG00185022797	pseudogene	Chr18:25771545-25771906 (-)
FVB/NJ	ENSMUSG00205023439	pseudogene	Chr18:25515714-25516075 (-)
JF1/MsJ	ENSUMUG00000026434	pseudogene	Chr18:25857967-25858328 (-)
LP/J	ENSMUSG00230006179	pseudogene	Chr18:27866891-27867252 (-)
NOD/ShiLtJ	ENSMUSG00190007046	pseudogene	Chr18:25583802-25584163 (-)
NZO/HlLtJ	ENSMUSG00225025693	pseudogene	Chr18:27813061-27813421 (-)
PWK/PhJ	ENSLUMG00010003729	pseudogene	Chr18:26024214-26024576 (-)
SPRET/EiJ	ENSMSPG00010023028	pseudogene	Chr18:25998767-25999127 (-)
WSB/EiJ	ENSIUOG00005002782	pseudogene	Chr18:25601214-25601574 (-)

Homology

• Gene Tree
  Gm34658
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000117348 (Evidence)
• NCBI Gene
  102637979

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000117348	Ensembl Gene Model | MGI Sequence Detail	362	C57BL/6J
transcript	ENSMUST00000234341	Ensembl | MGI Sequence Detail	362	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;