Gm34632 Gene Detail

Summary

• Symbol
  Gm34632
• Name
  predicted gene, 34632

• Feature Type
  lncRNA gene
• IDs
  MGI:5593791
  NCBI Gene: 102637946
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr18:57058815-57101392 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1088 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593791	lncRNA gene	Chr18:57058668-57230512 (+)
129S1/SvImJ	ENSMUSG00200033844	lncRNA gene	Chr18:54152955-54155480 (+)
A/J	ENSMUSG00195005668	lncRNA gene	Chr18:54272483-54274996 (+)
AKR/J	ENSMUSG00220016404	lncRNA gene	Chr18:54262597-54265108 (+)
BALB/cJ	ENSMUSG00180012542	lncRNA gene	Chr18:54846834-54849359 (+)
C3H/HeJ	ENSMUSG00175037593	lncRNA gene	Chr18:54465837-54468364 (+)
C57BL/6NJ	ENSMUSG00215039773	lncRNA gene	Chr18:53787173-53789698 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027837	lncRNA gene	Chr18:53669924-53672445 (+)
CBA/J	ENSMUSG00210033074	lncRNA gene	Chr18:54403279-54405792 (+)
DBA/2J	ENSMUSG00185015606	lncRNA gene	Chr18:54317929-54320456 (+)
FVB/NJ	ENSMUSG00205017640	lncRNA gene	Chr18:53772249-53774774 (+)
JF1/MsJ	ENSUMUG00000036927	lncRNA gene	Chr18:54208349-54210878 (+)
LP/J	ENSMUSG00230012075	lncRNA gene	Chr18:56326427-56328952 (+)
NOD/ShiLtJ	ENSMUSG00190036017	lncRNA gene	Chr18:54029437-54031962 (+)
NZO/HlLtJ	ENSMUSG00225035649	lncRNA gene	Chr18:56189686-56192211 (+)
PWK/PhJ	ENSLUMG00010008590	lncRNA gene	Chr18:54352347-54354846 (+)
SPRET/EiJ	ENSMSPG00010019287	lncRNA gene	Chr18:54732542-54735154 (+)
WSB/EiJ	ENSIUOG00005009323	lncRNA gene	Chr18:53947231-53949756 (+)

Homology

• Gene Tree
  Gm34632
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm34632
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  97
• RefSeq
  1

• Ensembl
  ENSMUSG00000119992 (Evidence)
• NCBI Gene
  102637946

Representative Sequences			Length	Strain/Species
genomic	102637946	NCBI Gene Model | MGI Sequence Detail	42578	C57BL/6J
transcript	NR_166732	RefSeq | MGI Sequence Detail	3771	ZRU/MplStud

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67

TSS for Gm34632:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr151172	Chr18:57058805-57058824 (+)	0 bp
Tssr151173	Chr18:57058835-57058855 (+)	30 bp
Tssr151174	Chr18:57060151-57060160 (+)	1,341 bp