Gm34611 Gene Detail

Summary

• Symbol
  Gm34611
• Name
  predicted gene, 34611

• Feature Type
  lncRNA gene
• IDs
  MGI:5593770
  NCBI Gene: 102637919
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:38954198-38956943 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  231 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5593770	lncRNA gene	Chr12:38952331-38957003 (-)
129S1/SvImJ	ENSMUSG00200011872	lncRNA gene	Chr12:30822543-30823441 (-)
A/J	ENSMUSG00195018636	lncRNA gene	Chr12:33492753-33493651 (-)
AKR/J	ENSMUSG00220005190	lncRNA gene	Chr12:31472191-31473089 (-)
BALB/cJ	ENSMUSG00180003652	lncRNA gene	Chr12:32479938-32480836 (-)
C3H/HeJ	ENSMUSG00175018244	lncRNA gene	Chr12:35533284-35534182 (-)
C57BL/6NJ	ENSMUSG00215013496	lncRNA gene	Chr12:31894557-31895455 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003848	lncRNA gene	Chr12:32241241-32242139 (-)
CBA/J	ENSMUSG00210016183	lncRNA gene	Chr12:32012332-32013230 (-)
DBA/2J	ENSMUSG00185020863	lncRNA gene	Chr12:34046711-34047609 (-)
FVB/NJ	ENSMUSG00205001576	lncRNA gene	Chr12:31986922-31987833 (-)
JF1/MsJ	ENSUMUG00000011483	lncRNA gene	Chr12:38227237-38228133 (-)
LP/J	ENSMUSG00230010631	lncRNA gene	Chr12:40987614-40988512 (-)
NOD/ShiLtJ	ENSMUSG00190003589	lncRNA gene	Chr12:31054541-31055451 (-)
NZO/HlLtJ	ENSMUSG00225031608	lncRNA gene	Chr12:43209509-43210407 (-)
PWK/PhJ	ENSLUMG00010012710	lncRNA gene	Chr12:32388770-32389667 (-)
SPRET/EiJ	ENSMSPG00010001991	lncRNA gene	Chr12:33177718-33178616 (-)
WSB/EiJ	ENSIUOG00005001409	lncRNA gene	Chr12:31776678-31777588 (-)

Homology

• Gene Tree
  Gm34611
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000113933 (Evidence)
• NCBI Gene
  102637919

Representative Sequences			Length	Strain/Species
genomic	102637919	NCBI Gene Model | MGI Sequence Detail	2746	C57BL/6J
transcript	XR_381456	RefSeq | MGI Sequence Detail	455	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;